The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474387

Identifier: 113474387

GI number: 113474387

Start: 827206

End: 828897

Strand: Reverse

Name: 113474387

Synonym: Tery_0523

Alternate gene names: NA

Gene position: 828897-827206 (Counterclockwise)

Preceding gene: 113474396

Following gene: 113474386

Centisome position: 10.7

GC content: 38.53

Gene sequence:

>1692_bases
ATGAAACTACCACAACAACCGACAATACCGAATACTCAAAATATTATCTCTTGGCTAAAATTCCAAAGCCCCTCACAGCT
TGAAAACCTAGAGTCTGTGAACAAAACCTCTAAAAAGAACCCTCTTTTCTGGTGTTATTGGTTAAAAAATCTGGTTTGCG
TCGATCCCAATGAACTACATGGCACCGGTTATGTATCTAAAGAATTAGAAAAATCCTCTCTAGTAACAGCCTCCGTTACA
ACCTTTGCCAATTGGTGGAATGCATTCACAACCTTGCCATTCTTAATTTTTATGTTCGACAGCATGGGAATACTCACCTG
GCCTATTGCTGTATTGGCTAACATAGGGCTAATTAAACTAGGCAACGCTCTCGCTACCGGTGCCGCCTCCAATCAACCCA
TAAGCATACGCTTTGCTCGAATTGGTAGCAGCGGTTTCATTGCCATCAACCTCATCCTAACCATCACATCAGGAGTCGGT
TCAGAACTACTATTAAATCAATCCGGTTTGAGTCGAAAATTGGGAGAACAGTTAGTTCAAGAATCTATTTTTGAACCTTT
GGAAAAGGAAATTTCAGATATTCAAAATAATAAAACTCTGGAGAAAACTCGCAACAGATGTGATACCTTAGAGCGTAAGC
TCGAACAACTGCCCCCCAACGACCCCAAAAGGGATGAACTCTACCTAGCTGCTCATGGTCCATATGCAGATAGATTTAAC
CTGGGCGGTTATAGCTACTATAAAAACAAGGACATAGAACAATGGCCTGCATGTCCTAAAGCTAACGAGCTAGAAGCTAT
AAGGGATAACGATCTCAAAGTTCCCAAGGAAAAGTACCAGCAAAAAATAAAAGAAGTCAAAAACTATGGTAGTGATCTAG
TCTACCTCAAAGCGGTTAGACCCAAAATTTATGACTCACGGTTTAATGAAAAAGGAGAAATTAAATCTGGAACAGAAGCA
ACAAGAGTAGCAATAGTATTATTCACCAAGAAATTATTTAGCCTTCAGTGGGCAGACCTCGGACAGAGTCTATTTGTTAT
GAGCATATCCGTGATCACCTCAACTGTAGCTATCTGGATCACCATTTCTTATTCAAAACGAGAAGATGTTCAACTTTCTA
AAAGTACAGCAGTAATTAACGCCAGAGATGTGTTCATTAATAAGACTATTTCTAGCTTAGACAACAACCAAGCAGACATG
CAAGAACTGGACAAGAAGCTGTTAAGAGGATTTTTTAGCGAGCTAAGACGCACTGGAAAGTGCAATTATCCACCCTTTGT
TAAGTACGTCAAATTTGCCAGAGATATCGAAAAATCCCAGCATTTAAGAGACAATATAGAAACAGTTGAAACTGCTGTAG
AACAAATTAAAAATGGTTTTCAGCAGTTAACAGATAGTATCAACGACCCAGAAAATACTGCCGCTAACGATGCTAAAAAC
CTTATTCATCAAGGATGTGATTCTATCATACTCTTAGCCTTAGAATACTTCCAGACGGAATCTCAGGTTAAGGAATTAAT
TAAAACAATACAATATGTACAAGGATATCTACAACATTCCCATGTAAATCAATCATTAGCAACTCGCCAAATTGGCTACC
TGCAAGAGCTATTAACTTCCAGTATTAATTTAGGCGATCGCCTAAAGAAAGCTATTCAAAAAAAATATAACACCATCATA
GGAAATCACTAA

Upstream 100 bases:

>100_bases
TGAAATTATTTTTGCAACAAAATCAATTTTCTCACCGATAGAAAAATATTCCTCACTCAACCCAATTGATCAAACCCATA
AAACCAAAAAAACACAACTC

Downstream 100 bases:

>100_bases
TGTCTACCCAAAAATTACCAGTAAATTTCAAATATAAACTTGATCATGATAGCACAAAAATGGTTCCAAGTAAGCAAGAA
AAACAAAATTTCATTGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MKLPQQPTIPNTQNIISWLKFQSPSQLENLESVNKTSKKNPLFWCYWLKNLVCVDPNELHGTGYVSKELEKSSLVTASVT
TFANWWNAFTTLPFLIFMFDSMGILTWPIAVLANIGLIKLGNALATGAASNQPISIRFARIGSSGFIAINLILTITSGVG
SELLLNQSGLSRKLGEQLVQESIFEPLEKEISDIQNNKTLEKTRNRCDTLERKLEQLPPNDPKRDELYLAAHGPYADRFN
LGGYSYYKNKDIEQWPACPKANELEAIRDNDLKVPKEKYQQKIKEVKNYGSDLVYLKAVRPKIYDSRFNEKGEIKSGTEA
TRVAIVLFTKKLFSLQWADLGQSLFVMSISVITSTVAIWITISYSKREDVQLSKSTAVINARDVFINKTISSLDNNQADM
QELDKKLLRGFFSELRRTGKCNYPPFVKYVKFARDIEKSQHLRDNIETVETAVEQIKNGFQQLTDSINDPENTAANDAKN
LIHQGCDSIILLALEYFQTESQVKELIKTIQYVQGYLQHSHVNQSLATRQIGYLQELLTSSINLGDRLKKAIQKKYNTII
GNH

Sequences:

>Translated_563_residues
MKLPQQPTIPNTQNIISWLKFQSPSQLENLESVNKTSKKNPLFWCYWLKNLVCVDPNELHGTGYVSKELEKSSLVTASVT
TFANWWNAFTTLPFLIFMFDSMGILTWPIAVLANIGLIKLGNALATGAASNQPISIRFARIGSSGFIAINLILTITSGVG
SELLLNQSGLSRKLGEQLVQESIFEPLEKEISDIQNNKTLEKTRNRCDTLERKLEQLPPNDPKRDELYLAAHGPYADRFN
LGGYSYYKNKDIEQWPACPKANELEAIRDNDLKVPKEKYQQKIKEVKNYGSDLVYLKAVRPKIYDSRFNEKGEIKSGTEA
TRVAIVLFTKKLFSLQWADLGQSLFVMSISVITSTVAIWITISYSKREDVQLSKSTAVINARDVFINKTISSLDNNQADM
QELDKKLLRGFFSELRRTGKCNYPPFVKYVKFARDIEKSQHLRDNIETVETAVEQIKNGFQQLTDSINDPENTAANDAKN
LIHQGCDSIILLALEYFQTESQVKELIKTIQYVQGYLQHSHVNQSLATRQIGYLQELLTSSINLGDRLKKAIQKKYNTII
GNH
>Mature_563_residues
MKLPQQPTIPNTQNIISWLKFQSPSQLENLESVNKTSKKNPLFWCYWLKNLVCVDPNELHGTGYVSKELEKSSLVTASVT
TFANWWNAFTTLPFLIFMFDSMGILTWPIAVLANIGLIKLGNALATGAASNQPISIRFARIGSSGFIAINLILTITSGVG
SELLLNQSGLSRKLGEQLVQESIFEPLEKEISDIQNNKTLEKTRNRCDTLERKLEQLPPNDPKRDELYLAAHGPYADRFN
LGGYSYYKNKDIEQWPACPKANELEAIRDNDLKVPKEKYQQKIKEVKNYGSDLVYLKAVRPKIYDSRFNEKGEIKSGTEA
TRVAIVLFTKKLFSLQWADLGQSLFVMSISVITSTVAIWITISYSKREDVQLSKSTAVINARDVFINKTISSLDNNQADM
QELDKKLLRGFFSELRRTGKCNYPPFVKYVKFARDIEKSQHLRDNIETVETAVEQIKNGFQQLTDSINDPENTAANDAKN
LIHQGCDSIILLALEYFQTESQVKELIKTIQYVQGYLQHSHVNQSLATRQIGYLQELLTSSINLGDRLKKAIQKKYNTII
GNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63838; Mature: 63838

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPQQPTIPNTQNIISWLKFQSPSQLENLESVNKTSKKNPLFWCYWLKNLVCVDPNELH
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCC
GTGYVSKELEKSSLVTASVTTFANWWNAFTTLPFLIFMFDSMGILTWPIAVLANIGLIKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHEE
GNALATGAASNQPISIRFARIGSSGFIAINLILTITSGVGSELLLNQSGLSRKLGEQLVQ
CCHHHCCCCCCCCEEEEEEEECCCCEEEEEEEEHHHCCCCCHHHCCCCCHHHHHHHHHHH
ESIFEPLEKEISDIQNNKTLEKTRNRCDTLERKLEQLPPNDPKRDELYLAAHGPYADRFN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
LGGYSYYKNKDIEQWPACPKANELEAIRDNDLKVPKEKYQQKIKEVKNYGSDLVYLKAVR
CCCEECCCCCCCHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC
PKIYDSRFNEKGEIKSGTEATRVAIVLFTKKLFSLQWADLGQSLFVMSISVITSTVAIWI
CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEE
TISYSKREDVQLSKSTAVINARDVFINKTISSLDNNQADMQELDKKLLRGFFSELRRTGK
EEEECCCCCCEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
CNYPPFVKYVKFARDIEKSQHLRDNIETVETAVEQIKNGFQQLTDSINDPENTAANDAKN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LIHQGCDSIILLALEYFQTESQVKELIKTIQYVQGYLQHSHVNQSLATRQIGYLQELLTS
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SINLGDRLKKAIQKKYNTIIGNH
HCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLPQQPTIPNTQNIISWLKFQSPSQLENLESVNKTSKKNPLFWCYWLKNLVCVDPNELH
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCC
GTGYVSKELEKSSLVTASVTTFANWWNAFTTLPFLIFMFDSMGILTWPIAVLANIGLIKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHEE
GNALATGAASNQPISIRFARIGSSGFIAINLILTITSGVGSELLLNQSGLSRKLGEQLVQ
CCHHHCCCCCCCCEEEEEEEECCCCEEEEEEEEHHHCCCCCHHHCCCCCHHHHHHHHHHH
ESIFEPLEKEISDIQNNKTLEKTRNRCDTLERKLEQLPPNDPKRDELYLAAHGPYADRFN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
LGGYSYYKNKDIEQWPACPKANELEAIRDNDLKVPKEKYQQKIKEVKNYGSDLVYLKAVR
CCCEECCCCCCCHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC
PKIYDSRFNEKGEIKSGTEATRVAIVLFTKKLFSLQWADLGQSLFVMSISVITSTVAIWI
CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEE
TISYSKREDVQLSKSTAVINARDVFINKTISSLDNNQADMQELDKKLLRGFFSELRRTGK
EEEECCCCCCEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
CNYPPFVKYVKFARDIEKSQHLRDNIETVETAVEQIKNGFQQLTDSINDPENTAANDAKN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LIHQGCDSIILLALEYFQTESQVKELIKTIQYVQGYLQHSHVNQSLATRQIGYLQELLTS
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SINLGDRLKKAIQKKYNTIIGNH
HCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA