| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474396
Identifier: 113474396
GI number: 113474396
Start: 842842
End: 843702
Strand: Reverse
Name: 113474396
Synonym: Tery_0532
Alternate gene names: NA
Gene position: 843702-842842 (Counterclockwise)
Preceding gene: 113474397
Following gene: 113474387
Centisome position: 10.89
GC content: 28.46
Gene sequence:
>861_bases GTGAACAAAATACCAGAGGTAATCAAACATAGTCAATTATTAAAAAGGTTAGTGCTTGATATTGAAACAGTTGAAGATCA AGGTTGTATAGAAGAATTATGCCTCAACATTCAATCTCATCAGGTTATAGGTTTTATCTGTAAATCTGGTTTTTTTGGTA GACAAAAAAAATATTTTACTTGGAAACAAGTTGAGACTATTGGTGTTGATGCTACTCTAGTTAATGGAAAATCACAGCCA AATAATTTAGAAAATTATAATAATATTATTCACATAATTGGAAATGAAGTTTGGACTGATACAGGGGAAAAAGTAGGTTT TATTGTAGAATATCTTCTCAATATTAAAACAGGTGAAATAGTTAATTATTTGTTTAAATATAATGGTTTGCAAGGTGCTT TAAATAGTATTTATTTATTGAATCCAGAAGCAATTTCAAGTGTGGGTAATAAACGGGTAATAGTAGTTAATAATTATCTA GATAATTCTCAGTATTATGATAGAGGAGTGGCTCAAAAATTAAGTCTTATTCAGAACTTTTTACAAGCGGATTTAGTTAG AACTAGAGAACATATTGATATCGCACAGAATCAAGCAAATAAATTAGCTCTAAGATTTAAAGAAAGAGCTAAAGTTATGC AAAAAAAAGCTCAAGAAAAACAAGATGTTGTGACCGAAAAAGCTGAACAAAAACAGGAATATTTTCCAAGTTACTCTACA CAAAAAAAAACTCTAAAAAATAAGTTAATTATAGATAAGTTTTCTACCAGAATTCAGGAAGTAATCACAGAAGCTAAAGA AAAAATTGATGGCATAGAATCTCAAGGGGAAAAAAACTTTAATTCCTCAAAAGATGATTGA
Upstream 100 bases:
>100_bases GGAGCTGATACTATTTGTAATAATATTTTTTCCAAATGGTATTACTTATTCCTAAATTAAATATATATATTTATCAAAGC TCTGTTTGAGGAATAAAATT
Downstream 100 bases:
>100_bases GCAAAAGCAGAATTCATTATCGGTAAACTTATTAACTACCTGTATTTTTTATAATTAGTTTATACATTTCTATTCTATTT TTTGAATCGTTGTTTCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNKIPEVIKHSQLLKRLVLDIETVEDQGCIEELCLNIQSHQVIGFICKSGFFGRQKKYFTWKQVETIGVDATLVNGKSQP NNLENYNNIIHIIGNEVWTDTGEKVGFIVEYLLNIKTGEIVNYLFKYNGLQGALNSIYLLNPEAISSVGNKRVIVVNNYL DNSQYYDRGVAQKLSLIQNFLQADLVRTREHIDIAQNQANKLALRFKERAKVMQKKAQEKQDVVTEKAEQKQEYFPSYST QKKTLKNKLIIDKFSTRIQEVITEAKEKIDGIESQGEKNFNSSKDD
Sequences:
>Translated_286_residues MNKIPEVIKHSQLLKRLVLDIETVEDQGCIEELCLNIQSHQVIGFICKSGFFGRQKKYFTWKQVETIGVDATLVNGKSQP NNLENYNNIIHIIGNEVWTDTGEKVGFIVEYLLNIKTGEIVNYLFKYNGLQGALNSIYLLNPEAISSVGNKRVIVVNNYL DNSQYYDRGVAQKLSLIQNFLQADLVRTREHIDIAQNQANKLALRFKERAKVMQKKAQEKQDVVTEKAEQKQEYFPSYST QKKTLKNKLIIDKFSTRIQEVITEAKEKIDGIESQGEKNFNSSKDD >Mature_286_residues MNKIPEVIKHSQLLKRLVLDIETVEDQGCIEELCLNIQSHQVIGFICKSGFFGRQKKYFTWKQVETIGVDATLVNGKSQP NNLENYNNIIHIIGNEVWTDTGEKVGFIVEYLLNIKTGEIVNYLFKYNGLQGALNSIYLLNPEAISSVGNKRVIVVNNYL DNSQYYDRGVAQKLSLIQNFLQADLVRTREHIDIAQNQANKLALRFKERAKVMQKKAQEKQDVVTEKAEQKQEYFPSYST QKKTLKNKLIIDKFSTRIQEVITEAKEKIDGIESQGEKNFNSSKDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32827; Mature: 32827
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIPEVIKHSQLLKRLVLDIETVEDQGCIEELCLNIQSHQVIGFICKSGFFGRQKKYFT CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEE WKQVETIGVDATLVNGKSQPNNLENYNNIIHIIGNEVWTDTGEKVGFIVEYLLNIKTGEI HHHHHHHCCCEEEECCCCCCCCCHHHHCEEEEECCHHHCCCCHHHHHHHHHHHHCCHHHH VNYLFKYNGLQGALNSIYLLNPEAISSVGNKRVIVVNNYLDNSQYYDRGVAQKLSLIQNF HHHHHHHCCHHHHHCCEEEECHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH LQADLVRTREHIDIAQNQANKLALRFKERAKVMQKKAQEKQDVVTEKAEQKQEYFPSYST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QKKTLKNKLIIDKFSTRIQEVITEAKEKIDGIESQGEKNFNSSKDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC >Mature Secondary Structure MNKIPEVIKHSQLLKRLVLDIETVEDQGCIEELCLNIQSHQVIGFICKSGFFGRQKKYFT CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEE WKQVETIGVDATLVNGKSQPNNLENYNNIIHIIGNEVWTDTGEKVGFIVEYLLNIKTGEI HHHHHHHCCCEEEECCCCCCCCCHHHHCEEEEECCHHHCCCCHHHHHHHHHHHHCCHHHH VNYLFKYNGLQGALNSIYLLNPEAISSVGNKRVIVVNNYLDNSQYYDRGVAQKLSLIQNF HHHHHHHCCHHHHHCCEEEECHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH LQADLVRTREHIDIAQNQANKLALRFKERAKVMQKKAQEKQDVVTEKAEQKQEYFPSYST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QKKTLKNKLIIDKFSTRIQEVITEAKEKIDGIESQGEKNFNSSKDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA