The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113474369

Identifier: 113474369

GI number: 113474369

Start: 803667

End: 804314

Strand: Reverse

Name: 113474369

Synonym: Tery_0502

Alternate gene names: NA

Gene position: 804314-803667 (Counterclockwise)

Preceding gene: 113474370

Following gene: 113474367

Centisome position: 10.38

GC content: 27.93

Gene sequence:

>648_bases
ATGAAAAGTATTTTAAGTTTACGGAAATTGCTCAAAAATTTCTTCAAATTTGCAGATTTTAGAAAAAAATTATCAAAGTT
TTTCTATGTTTCTTTGGTAGGAATTTTGATAATTATTCCTAGTGTTTTAATATTTACTGCTCAACCAGCAGATGGGATAG
ATGAAATTCAAATTATTTATGAATCAATTAATATAACAATAACTATTTCTGATTTAGAGAAATTTGCAGATACAGGAGAA
CAGTCTGAGCAATTAAAGTCACTATTTTTAACAACGAATGCTAGTCAGAAAAATATTGATACAATTCAGGCAATTTTAAT
TTATAAGTTACAGGTAAAACCAGATTTGCTGAATAAATTATTAGAATCTCGTTATGGTCAACTTGCTATTGACGAATTTA
GTCGCCATTTTTTCCCAGATAGTAATGTATCTAAAATAACTGATAATATTCTTGATACAATTAACAACATTATTGCTGAT
GGAGAAGTATCATTTTTAGAGCTGATACAAAATTTTAAATGGACAGATAAAATTGTCGTTGATGCTAAAGGTATTGAAAC
ATTTTTGGTAGAAACCATAGAATTTGCCAAAAGAGGAATAGATTTTGTGAGAGAACAACCCTCCCTGCAAAAAATATTTT
GCGGATAA

Upstream 100 bases:

>100_bases
TGGGTAACCTAAAATCAGATATTTCAGACTTTAGGCATAAGAGCAAAAAGCTATTAAACATATAAATATATATGTTCATC
TATTTGTGATAAATACCAAA

Downstream 100 bases:

>100_bases
TACAAATCTGTTAATATTAGTATAATTTACATAGTTAATTAGGAGTTCAAACCAAGAACTCATTGGAACAAGAAATTATT
CTTGGAGTAGATGGCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKSILSLRKLLKNFFKFADFRKKLSKFFYVSLVGILIIIPSVLIFTAQPADGIDEIQIIYESINITITISDLEKFADTGE
QSEQLKSLFLTTNASQKNIDTIQAILIYKLQVKPDLLNKLLESRYGQLAIDEFSRHFFPDSNVSKITDNILDTINNIIAD
GEVSFLELIQNFKWTDKIVVDAKGIETFLVETIEFAKRGIDFVREQPSLQKIFCG

Sequences:

>Translated_215_residues
MKSILSLRKLLKNFFKFADFRKKLSKFFYVSLVGILIIIPSVLIFTAQPADGIDEIQIIYESINITITISDLEKFADTGE
QSEQLKSLFLTTNASQKNIDTIQAILIYKLQVKPDLLNKLLESRYGQLAIDEFSRHFFPDSNVSKITDNILDTINNIIAD
GEVSFLELIQNFKWTDKIVVDAKGIETFLVETIEFAKRGIDFVREQPSLQKIFCG
>Mature_215_residues
MKSILSLRKLLKNFFKFADFRKKLSKFFYVSLVGILIIIPSVLIFTAQPADGIDEIQIIYESINITITISDLEKFADTGE
QSEQLKSLFLTTNASQKNIDTIQAILIYKLQVKPDLLNKLLESRYGQLAIDEFSRHFFPDSNVSKITDNILDTINNIIAD
GEVSFLELIQNFKWTDKIVVDAKGIETFLVETIEFAKRGIDFVREQPSLQKIFCG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24567; Mature: 24567

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSILSLRKLLKNFFKFADFRKKLSKFFYVSLVGILIIIPSVLIFTAQPADGIDEIQIIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH
ESINITITISDLEKFADTGEQSEQLKSLFLTTNASQKNIDTIQAILIYKLQVKPDLLNKL
HHHEEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
LESRYGQLAIDEFSRHFFPDSNVSKITDNILDTINNIIADGEVSFLELIQNFKWTDKIVV
HHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEE
DAKGIETFLVETIEFAKRGIDFVREQPSLQKIFCG
ECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MKSILSLRKLLKNFFKFADFRKKLSKFFYVSLVGILIIIPSVLIFTAQPADGIDEIQIIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHH
ESINITITISDLEKFADTGEQSEQLKSLFLTTNASQKNIDTIQAILIYKLQVKPDLLNKL
HHHEEEEEHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
LESRYGQLAIDEFSRHFFPDSNVSKITDNILDTINNIIADGEVSFLELIQNFKWTDKIVV
HHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEE
DAKGIETFLVETIEFAKRGIDFVREQPSLQKIFCG
ECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA