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The map label for this gene is ychA [C]

Identifier: 113474370

GI number: 113474370

Start: 804736

End: 805560

Strand: Reverse

Name: ychA [C]

Synonym: Tery_0503

Alternate gene names: 113474370

Gene position: 805560-804736 (Counterclockwise)

Preceding gene: 113474371

Following gene: 113474369

Centisome position: 10.39

GC content: 29.58

Gene sequence:

>825_bases
ATGAATCTTTCCCCATATCGACAATTATTTTATTCAGAAGTTAATAAATCTGATGAAAAAATAGATTTAGCTAAAGCTGC
TCTTTATTTAGCTTTGGAAGATGATAAGGAATTTGAACCCAATAAGTATTTAGATGCTCTTAATACAATGGCAAATGAAG
TACAAGAAACATTACCAGCAACTTTATATCCTTTACAAATTATTAAGAGTATTAATAACTATCTTTATAATGATTTAGGT
TTTTCTGGAAACACAATTGATTATTATGATCTAAGGAATAGTTGTCTGAATCAAGTAATTGAAAGACGCACTGGAATTCC
AATTACTTTATCCCTAGTTTATCTAGAAATTGCTAAAAGAATTAATTTTCCAATGGTAGGTATTGGAATGCCAGGACATT
TTTTAATTAGACCTAATTTTGAAGAAGCTGGTATATATGTAGATGCTTTTAATAAAGGTGAAATTCTTTTTCCTCAAGAC
TGTCAAGAAAAGTTAGCCAAAATTTATGGTCAACCACTAAAACTACAACCTCAGTTTTTGGCAACTGTAAGTAATAAGCA
ATTTTTAGCACGAATGTTAACAAATATTAAAGGAATTTACTGGAGTCAAAATGAGAGGTTAAAAGCTATTGCAGCTATTG
ATAGGATTTTACTATTATTTCCAAATGCAGTTATGGAAAAGCGAGACCGAGGTGTATTATATTATCAACTAGATATTTGG
GCAAAAGCTCGTGAAGATCTAGAAAGTTATATAGTTAATCTTCCTCAAGCTGATGATGCAGAGATAATTAGAAAATTACT
GGCTAAAATTAGTCAATATCAATAA

Upstream 100 bases:

>100_bases
GTGATTTCTGTCATTTTAATGACCACTAAAAAAAATCTGTTTCAGGTATCCTCCTTGATAAGAGATACTAATAACTAATA
ACTAATAACTAATAACTAAT

Downstream 100 bases:

>100_bases
TAACAAATATCAAAAGTATTGCTATATTTTATTGAGAGTAAGGAGTCATGAATAGGGAGTAAAGAGCAGGGGTATTAGAA
ATAAGTACTCTTAAATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNLSPYRQLFYSEVNKSDEKIDLAKAALYLALEDDKEFEPNKYLDALNTMANEVQETLPATLYPLQIIKSINNYLYNDLG
FSGNTIDYYDLRNSCLNQVIERRTGIPITLSLVYLEIAKRINFPMVGIGMPGHFLIRPNFEEAGIYVDAFNKGEILFPQD
CQEKLAKIYGQPLKLQPQFLATVSNKQFLARMLTNIKGIYWSQNERLKAIAAIDRILLLFPNAVMEKRDRGVLYYQLDIW
AKAREDLESYIVNLPQADDAEIIRKLLAKISQYQ

Sequences:

>Translated_274_residues
MNLSPYRQLFYSEVNKSDEKIDLAKAALYLALEDDKEFEPNKYLDALNTMANEVQETLPATLYPLQIIKSINNYLYNDLG
FSGNTIDYYDLRNSCLNQVIERRTGIPITLSLVYLEIAKRINFPMVGIGMPGHFLIRPNFEEAGIYVDAFNKGEILFPQD
CQEKLAKIYGQPLKLQPQFLATVSNKQFLARMLTNIKGIYWSQNERLKAIAAIDRILLLFPNAVMEKRDRGVLYYQLDIW
AKAREDLESYIVNLPQADDAEIIRKLLAKISQYQ
>Mature_274_residues
MNLSPYRQLFYSEVNKSDEKIDLAKAALYLALEDDKEFEPNKYLDALNTMANEVQETLPATLYPLQIIKSINNYLYNDLG
FSGNTIDYYDLRNSCLNQVIERRTGIPITLSLVYLEIAKRINFPMVGIGMPGHFLIRPNFEEAGIYVDAFNKGEILFPQD
CQEKLAKIYGQPLKLQPQFLATVSNKQFLARMLTNIKGIYWSQNERLKAIAAIDRILLLFPNAVMEKRDRGVLYYQLDIW
AKAREDLESYIVNLPQADDAEIIRKLLAKISQYQ

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306500, Length=208, Percent_Identity=33.1730769230769, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI16306502, Length=194, Percent_Identity=34.020618556701, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI1787465, Length=238, Percent_Identity=23.5294117647059, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31622; Mature: 31622

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSPYRQLFYSEVNKSDEKIDLAKAALYLALEDDKEFEPNKYLDALNTMANEVQETLPA
CCCCHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
TLYPLQIIKSINNYLYNDLGFSGNTIDYYDLRNSCLNQVIERRTGIPITLSLVYLEIAKR
HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
INFPMVGIGMPGHFLIRPNFEEAGIYVDAFNKGEILFPQDCQEKLAKIYGQPLKLQPQFL
CCCCEEEECCCCCEEEECCCHHCCEEEEECCCCCEECCHHHHHHHHHHCCCCCCCCHHHH
ATVSNKQFLARMLTNIKGIYWSQNERLKAIAAIDRILLLFPNAVMEKRDRGVLYYQLDIW
HHHCCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEHHH
AKAREDLESYIVNLPQADDAEIIRKLLAKISQYQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLSPYRQLFYSEVNKSDEKIDLAKAALYLALEDDKEFEPNKYLDALNTMANEVQETLPA
CCCCHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
TLYPLQIIKSINNYLYNDLGFSGNTIDYYDLRNSCLNQVIERRTGIPITLSLVYLEIAKR
HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
INFPMVGIGMPGHFLIRPNFEEAGIYVDAFNKGEILFPQDCQEKLAKIYGQPLKLQPQFL
CCCCEEEECCCCCEEEECCCHHCCEEEEECCCCCEECCHHHHHHHHHHCCCCCCCCHHHH
ATVSNKQFLARMLTNIKGIYWSQNERLKAIAAIDRILLLFPNAVMEKRDRGVLYYQLDIW
HHHCCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEHHH
AKAREDLESYIVNLPQADDAEIIRKLLAKISQYQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]