| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474356
Identifier: 113474356
GI number: 113474356
Start: 781534
End: 783267
Strand: Direct
Name: 113474356
Synonym: Tery_0488
Alternate gene names: NA
Gene position: 781534-783267 (Clockwise)
Preceding gene: 113474355
Following gene: 113474357
Centisome position: 10.08
GC content: 35.29
Gene sequence:
>1734_bases ATGTTAATTCTGAAAAAAATGAATGATGAAAAAACTGTGATTGGTTCTAACTATTCTGGTATTTCTTATCTATTGGATAA TAATCATAATCAATTTACTGTACCTGTAAATTTACTAATTCCATATTCAGCAGGTCTACAAGCTTTAGATGGAAATGATA CAATAATAGGCTCATTAAGCCCTGAATTGATTAATGGTAATCAAGGTAACGATAATATTTTTGGTGGAAGTGGTTCTGAT ACTTTACGAGGTGGTAGAGGTAATGATTTTATTGAAGCTGACCAAGGTAACGATCAAGTTTTTGGAGATTTAGGTAAGGA TACAGTTTATGGAGAAATCGGAAATGATCAAATTTATGGAGGGAAAGGAGAGGATATTTTATTCGGAGGCAATGGTAATG ATACAATTTATGGGGATTTAGGAAAAGATACATTAATTGGAGAAGCAGGCAATGATATATTTGTTTTGCGAGATTCACCA AATAATAACAATTTAGATACTGCAGATATTATTTATGATTTTAATCCTAATTTTGACAGTATTCAAATGCCAGCAAACTT AACAGAAAGTGACATTCTATTAAGAGAAGATTTTTATTATGGAGGTACATTAATTCAAGTTCAGGCAAATGGTTCCATAT TAGCAATAGTTAAAGACATATCTAATACAAACGTTAAAAGTGAGTTAATTTTTGGAGATACCGCAAATACTAATGAACTT TTACAAACGAATAGTTCTGTAAGACCAACCTTTAATAATATTTTTGGATATGGTTTAGTCGATGCCTCAGCAGCAGTAGC CAGTGCTATTGGTAGTACTTCCTTTCCAGAAGTTCCTGATTTAGGAGGAAATCAGTGGGGACTAGACTTGGTTAAAGCAC CCGAAGTTTGGAATCAAGGCTTTCTGGGAGATGGTATTGTAGTAGCCGTTATTGATAGTGGTGTAGACTATACCCATCCA GAATTAACAGGCCAAATTTGGAAGAATAGCCGTGAAATTCCTAACAATAATATTGATGATGATGCTAATGGCTATGTGGA TGATTTTCAGGGTTGGGATTTTATCAATGATGATAATGACTCAAGAGATGAAAAAGGTCATGGAACTCATATTGCAGGCA CTATAGCTGCCAAGAGAGATGGGATAGGGACAACTGGTATAGCTCCAAATGTCCAAATTATGCCTCTCAGGATACTTAAT GATCAAGGAACAGGTAAAGTTAGCGATGGTATAGAGGCTATTCGTTATGCTGTTGATAATGGAGCAGATGTGATTAACTT TAGCTCTGGTGATAGAAATTTAGTTAGTGGGGAAATTGAAGCTATTCGTTATGCTGCTGAACGAGGTGTTGTATTTGTTT CTGCTGCAGGTAATGGTAGTTTAAGTAGTCCTGATTATCCAGCAAAGTTAGCTGATAAACAGGGAATTGCGGTTGGGTCA GTAGAGAAAAATGGGAAATTTTCTTCTTTTTCCAATGAAGCTGGAAACCAACCTTTAGATTATGTCGTTGCTCCAGGGGG GGATGGTTTTCCTGAAGATGCAGGAGATATCTATGCCCCTGTACCTCTTTCTATAAAAGGTAATTTATATAGTTTCTTGA CAGGTACTTCAATGGCTACACCTTATGTTACAGGTATAGTAGCTTTAATTAAACAAGCTAATCCAAGTTTGTCTGTTGAG GCCATTGAAAATATAATTACTTATACTACTAACTCAGCAGATGTGATTGTCTAA
Upstream 100 bases:
>100_bases TTATAAATCAACTTCAAGTTTTTCAATTAAATATGTTCTCAAACTTTTTATAAAAAGGCTAGCGTAAATGCTAAGATATG CGCCATTAGTTTTTGTTTAG
Downstream 100 bases:
>100_bases TTTAGACTACTGAAGAAAATATGAATGGGAAAGGGACTGGGAATATCCTGGACAGATTTTTATAAAATCCCTGTATACTG GGCGCAAAAATACTTAAGTC
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MLILKKMNDEKTVIGSNYSGISYLLDNNHNQFTVPVNLLIPYSAGLQALDGNDTIIGSLSPELINGNQGNDNIFGGSGSD TLRGGRGNDFIEADQGNDQVFGDLGKDTVYGEIGNDQIYGGKGEDILFGGNGNDTIYGDLGKDTLIGEAGNDIFVLRDSP NNNNLDTADIIYDFNPNFDSIQMPANLTESDILLREDFYYGGTLIQVQANGSILAIVKDISNTNVKSELIFGDTANTNEL LQTNSSVRPTFNNIFGYGLVDASAAVASAIGSTSFPEVPDLGGNQWGLDLVKAPEVWNQGFLGDGIVVAVIDSGVDYTHP ELTGQIWKNSREIPNNNIDDDANGYVDDFQGWDFINDDNDSRDEKGHGTHIAGTIAAKRDGIGTTGIAPNVQIMPLRILN DQGTGKVSDGIEAIRYAVDNGADVINFSSGDRNLVSGEIEAIRYAAERGVVFVSAAGNGSLSSPDYPAKLADKQGIAVGS VEKNGKFSSFSNEAGNQPLDYVVAPGGDGFPEDAGDIYAPVPLSIKGNLYSFLTGTSMATPYVTGIVALIKQANPSLSVE AIENIITYTTNSADVIV
Sequences:
>Translated_577_residues MLILKKMNDEKTVIGSNYSGISYLLDNNHNQFTVPVNLLIPYSAGLQALDGNDTIIGSLSPELINGNQGNDNIFGGSGSD TLRGGRGNDFIEADQGNDQVFGDLGKDTVYGEIGNDQIYGGKGEDILFGGNGNDTIYGDLGKDTLIGEAGNDIFVLRDSP NNNNLDTADIIYDFNPNFDSIQMPANLTESDILLREDFYYGGTLIQVQANGSILAIVKDISNTNVKSELIFGDTANTNEL LQTNSSVRPTFNNIFGYGLVDASAAVASAIGSTSFPEVPDLGGNQWGLDLVKAPEVWNQGFLGDGIVVAVIDSGVDYTHP ELTGQIWKNSREIPNNNIDDDANGYVDDFQGWDFINDDNDSRDEKGHGTHIAGTIAAKRDGIGTTGIAPNVQIMPLRILN DQGTGKVSDGIEAIRYAVDNGADVINFSSGDRNLVSGEIEAIRYAAERGVVFVSAAGNGSLSSPDYPAKLADKQGIAVGS VEKNGKFSSFSNEAGNQPLDYVVAPGGDGFPEDAGDIYAPVPLSIKGNLYSFLTGTSMATPYVTGIVALIKQANPSLSVE AIENIITYTTNSADVIV >Mature_577_residues MLILKKMNDEKTVIGSNYSGISYLLDNNHNQFTVPVNLLIPYSAGLQALDGNDTIIGSLSPELINGNQGNDNIFGGSGSD TLRGGRGNDFIEADQGNDQVFGDLGKDTVYGEIGNDQIYGGKGEDILFGGNGNDTIYGDLGKDTLIGEAGNDIFVLRDSP NNNNLDTADIIYDFNPNFDSIQMPANLTESDILLREDFYYGGTLIQVQANGSILAIVKDISNTNVKSELIFGDTANTNEL LQTNSSVRPTFNNIFGYGLVDASAAVASAIGSTSFPEVPDLGGNQWGLDLVKAPEVWNQGFLGDGIVVAVIDSGVDYTHP ELTGQIWKNSREIPNNNIDDDANGYVDDFQGWDFINDDNDSRDEKGHGTHIAGTIAAKRDGIGTTGIAPNVQIMPLRILN DQGTGKVSDGIEAIRYAVDNGADVINFSSGDRNLVSGEIEAIRYAAERGVVFVSAAGNGSLSSPDYPAKLADKQGIAVGS VEKNGKFSSFSNEAGNQPLDYVVAPGGDGFPEDAGDIYAPVPLSIKGNLYSFLTGTSMATPYVTGIVALIKQANPSLSVE AIENIITYTTNSADVIV
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI76443679, Length=319, Percent_Identity=26.3322884012539, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25141268, Length=296, Percent_Identity=28.3783783783784, Blast_Score=86, Evalue=8e-17, Organism=Caenorhabditis elegans, GI71983555, Length=296, Percent_Identity=28.3783783783784, Blast_Score=85, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320775, Length=299, Percent_Identity=28.0936454849498, Blast_Score=74, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6324576, Length=297, Percent_Identity=28.6195286195286, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6319893, Length=284, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45550681, Length=267, Percent_Identity=25.4681647940075, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 61166; Mature: 61166
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER ; PS00330 HEMOLYSIN_CALCIUM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILKKMNDEKTVIGSNYSGISYLLDNNHNQFTVPVNLLIPYSAGLQALDGNDTIIGSLS CEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEEECCCCCEEECCCCEEEECCC PELINGNQGNDNIFGGSGSDTLRGGRGNDFIEADQGNDQVFGDLGKDTVYGEIGNDQIYG HHHCCCCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCEEEEECCCCEEEC GKGEDILFGGNGNDTIYGDLGKDTLIGEAGNDIFVLRDSPNNNNLDTADIIYDFNPNFDS CCCCEEEECCCCCCEEEECCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCC IQMPANLTESDILLREDFYYGGTLIQVQANGSILAIVKDISNTNVKSELIFGDTANTNEL EECCCCCCCCCEEEEECEEECCEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCHHH LQTNSSVRPTFNNIFGYGLVDASAAVASAIGSTSFPEVPDLGGNQWGLDLVKAPEVWNQG HHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHCCC FLGDGIVVAVIDSGVDYTHPELTGQIWKNSREIPNNNIDDDANGYVDDFQGWDFINDDND CCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRDEKGHGTHIAGTIAAKRDGIGTTGIAPNVQIMPLRILNDQGTGKVSDGIEAIRYAVDN CCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCC GADVINFSSGDRNLVSGEIEAIRYAAERGVVFVSAAGNGSLSSPDYPAKLADKQGIAVGS CCCEEEECCCCCCEECCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHCCCCCCEEEC VEKNGKFSSFSNEAGNQPLDYVVAPGGDGFPEDAGDIYAPVPLSIKGNLYSFLTGTSMAT CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEECCCEEEEECCCCCCC PYVTGIVALIKQANPSLSVEAIENIITYTTNSADVIV HHHHHHHHHHHHCCCCEEHHHHHHHHEEECCCCCEEC >Mature Secondary Structure MLILKKMNDEKTVIGSNYSGISYLLDNNHNQFTVPVNLLIPYSAGLQALDGNDTIIGSLS CEEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEEEEEEECCCCCEEECCCCEEEECCC PELINGNQGNDNIFGGSGSDTLRGGRGNDFIEADQGNDQVFGDLGKDTVYGEIGNDQIYG HHHCCCCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCEECCCCCCEEEEECCCCEEEC GKGEDILFGGNGNDTIYGDLGKDTLIGEAGNDIFVLRDSPNNNNLDTADIIYDFNPNFDS CCCCEEEECCCCCCEEEECCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCC IQMPANLTESDILLREDFYYGGTLIQVQANGSILAIVKDISNTNVKSELIFGDTANTNEL EECCCCCCCCCEEEEECEEECCEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCHHH LQTNSSVRPTFNNIFGYGLVDASAAVASAIGSTSFPEVPDLGGNQWGLDLVKAPEVWNQG HHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHCCC FLGDGIVVAVIDSGVDYTHPELTGQIWKNSREIPNNNIDDDANGYVDDFQGWDFINDDND CCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRDEKGHGTHIAGTIAAKRDGIGTTGIAPNVQIMPLRILNDQGTGKVSDGIEAIRYAVDN CCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCC GADVINFSSGDRNLVSGEIEAIRYAAERGVVFVSAAGNGSLSSPDYPAKLADKQGIAVGS CCCEEEECCCCCCEECCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHCCCCCCEEEC VEKNGKFSSFSNEAGNQPLDYVVAPGGDGFPEDAGDIYAPVPLSIKGNLYSFLTGTSMAT CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCEEECCCEEEEECCCCCCC PYVTGIVALIKQANPSLSVEAIENIITYTTNSADVIV HHHHHHHHHHHHCCCCEEHHHHHHHHEEECCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]