Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is amsG [H]

Identifier: 113474357

GI number: 113474357

Start: 783486

End: 784217

Strand: Direct

Name: amsG [H]

Synonym: Tery_0489

Alternate gene names: 113474357

Gene position: 783486-784217 (Clockwise)

Preceding gene: 113474356

Following gene: 113474358

Centisome position: 10.11

GC content: 34.43

Gene sequence:

>732_bases
ATGACTGCCGATAGCCAATTCATCTCTGGTAAAGTAATTAGAGGATTTACAGGGCGAGCTTTTCAGCCTTTCCTCCCCAG
AGATAAACACAAAAGTCAAATTCATCAAGTCCTAGAAATAGGATTTTCCAAACGATTATTCGATATCCTGTTTTCTCTAT
CTGTTCTCATATTGTTTTCCCCTGTTTACGTCCTGATAGCTTTGCTAATTGCATTCAGTTCACCAGGTTCAATCTTTTAT
GTTCAAGAAAGAGTAGGTAAAAATAGAAAGCTATTCCGTTGTTTAAAATTTAGAACCATGGTGCAAAATGCAGATGAAGT
GTTAGGAGAAATTATGGAAACTTGTCCTGATCTACGTCAAGAATTTCAAGATAGTTTTAAATTAAAACATGACCCTAGAA
TTACATGGATCGGTAGATTTCTAAGAATTACAAGTTTAGATGAATTTCCTCAATTTTGGAACGTTTTGAAAGGTGACATG
AGTGTAGTAGGCCCGAGACCATTAGTCCTTGAAGAACTAGCAAAATATGGTCATCACATGGATAAAATTCTTACCATTAA
ACCAGGAATAACTGGTTTGTGGCAAGTTTCTGGTCGCAATGATATTCCTTATCCTAAGAGAGTTCAAATAGATCTTTACT
ATGTAAATTTCCGAAATTTTTGGATAGATATATGGATCATGTTTAAAACTATTGGTATTGTTATTTTTCCAAAAAACAAC
GGTGCTTACTAA

Upstream 100 bases:

>100_bases
TGGTCCAAAATTAGTTTTATTTTTCATAACCAAAGTTGCCCTCTATTTCTCTATAGGCTTTATGATCATGACTGTGTGTG
GTGTGAAGTGAAGGAGTAAG

Downstream 100 bases:

>100_bases
TCCTGAATCATTAGGACTAAGAGATTTCAAATTATCTTAAACTATTGTAGGGTTAGAGGTTGGTGATATTTTTACAAATA
TTGAACCTCTAACCCAAATT

Product: undecaprenyl-phosphate galactosephosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTADSQFISGKVIRGFTGRAFQPFLPRDKHKSQIHQVLEIGFSKRLFDILFSLSVLILFSPVYVLIALLIAFSSPGSIFY
VQERVGKNRKLFRCLKFRTMVQNADEVLGEIMETCPDLRQEFQDSFKLKHDPRITWIGRFLRITSLDEFPQFWNVLKGDM
SVVGPRPLVLEELAKYGHHMDKILTIKPGITGLWQVSGRNDIPYPKRVQIDLYYVNFRNFWIDIWIMFKTIGIVIFPKNN
GAY

Sequences:

>Translated_243_residues
MTADSQFISGKVIRGFTGRAFQPFLPRDKHKSQIHQVLEIGFSKRLFDILFSLSVLILFSPVYVLIALLIAFSSPGSIFY
VQERVGKNRKLFRCLKFRTMVQNADEVLGEIMETCPDLRQEFQDSFKLKHDPRITWIGRFLRITSLDEFPQFWNVLKGDM
SVVGPRPLVLEELAKYGHHMDKILTIKPGITGLWQVSGRNDIPYPKRVQIDLYYVNFRNFWIDIWIMFKTIGIVIFPKNN
GAY
>Mature_242_residues
TADSQFISGKVIRGFTGRAFQPFLPRDKHKSQIHQVLEIGFSKRLFDILFSLSVLILFSPVYVLIALLIAFSSPGSIFYV
QERVGKNRKLFRCLKFRTMVQNADEVLGEIMETCPDLRQEFQDSFKLKHDPRITWIGRFLRITSLDEFPQFWNVLKGDMS
VVGPRPLVLEELAKYGHHMDKILTIKPGITGLWQVSGRNDIPYPKRVQIDLYYVNFRNFWIDIWIMFKTIGIVIFPKNNG
AY

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May act as a sugar transferase and may be involved in the export of the repeating unit by flipping the lipid carrier to the periplasmic face of the inner membrane [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=196, Percent_Identity=39.2857142857143, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 28311; Mature: 28179

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADSQFISGKVIRGFTGRAFQPFLPRDKHKSQIHQVLEIGFSKRLFDILFSLSVLILFS
CCCCCCHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVYVLIALLIAFSSPGSIFYVQERVGKNRKLFRCLKFRTMVQNADEVLGEIMETCPDLRQ
HHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFQDSFKLKHDPRITWIGRFLRITSLDEFPQFWNVLKGDMSVVGPRPLVLEELAKYGHHM
HHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCHH
DKILTIKPGITGLWQVSGRNDIPYPKRVQIDLYYVNFRNFWIDIWIMFKTIGIVIFPKNN
HHEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCEEEEECCC
GAY
CCC
>Mature Secondary Structure 
TADSQFISGKVIRGFTGRAFQPFLPRDKHKSQIHQVLEIGFSKRLFDILFSLSVLILFS
CCCCCHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVYVLIALLIAFSSPGSIFYVQERVGKNRKLFRCLKFRTMVQNADEVLGEIMETCPDLRQ
HHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFQDSFKLKHDPRITWIGRFLRITSLDEFPQFWNVLKGDMSVVGPRPLVLEELAKYGHHM
HHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHCCHH
DKILTIKPGITGLWQVSGRNDIPYPKRVQIDLYYVNFRNFWIDIWIMFKTIGIVIFPKNN
HHEEEECCCCCEEEEECCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCEEEEECCC
GAY
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]