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The map label for this gene is fdhD [H]

Identifier: 113474283

GI number: 113474283

Start: 637017

End: 637871

Strand: Direct

Name: fdhD [H]

Synonym: Tery_0406

Alternate gene names: 113474283

Gene position: 637017-637871 (Clockwise)

Preceding gene: 113474281

Following gene: 113474284

Centisome position: 8.22

GC content: 32.98

Gene sequence:

>855_bases
ATGTTCCCTAAATTATTACACATGAAAAATTCGCAAAGTAGCAAAACAAAAGCAAAAATTTGGGTAGTGGAAAATAATAA
TTTTGTTACTCATTCTGACCAATTAGCAACAGAAGAACCTTTGGAAATTAGGCTAAATTATCCCAAACAAACTATAGCAG
TGACAATGCGAACTCCAGGAGCAGATTTTGATTTAGCTGCTGGATTTCTCTATAGCGAAGGAGTCATCAAAAATCAAGAA
GATATTGCTAAAATTAGTTATTGTGTAGATCCAAAAGTTGATGGAAAACAACGCCAAAATATTATTAATGTTAGCCTTAA
ATCAGAATTAAACCCAAATTTAACAACCCTAGAAAGACATTTTTTGACAACTAGTGCTTGTGGAGTTTGTGGCAAAGCAA
GTATAGAATCTTTGCAAATAAAAGGGTTTTCGGCTATTCCTTTAGGATTAGAAGTTTCTGCAGAAATTATCTATAGTTTG
CCAGATAAATTAAATACTGCTCAAAGAGTGTTTAAATCTACAGGAGGTTTACATGCTGCTGGTTTATTTAATAGTGAAGG
AAAACTGTTAAAGTTACGGGAAGATGTGGGGAGACATAATGCTTTAGATAAGTTGATAGGTTCAGAATTTTTAGCAGGTC
AATTACCTTTAAATAATCTTATGGTTATGGTAAGTGGGCGATCGAGTTTTGAGATTTTACAAAAGTGTATAACTGCAGGT
TTGCCAATAGTTTGTGCTGTTTCTGCTCCTAGTAGTTTAGCGGTAGAAATAGCTAAGAGATTTAATATTACTTTGGTCGG
TTTTTTGCGTGGAAGAAAGTTTAATATTTATTCTGGTGTAGAAAGAATAAAGTAA

Upstream 100 bases:

>100_bases
ATTAAATTGCTGAAAATGCTAAATCCTAAAAAGACTATTTTTTTTGAATAAAACAAACTCAAACTATTTCTAGATTTCTA
GCTGTTTTATGACTCGATAA

Downstream 100 bases:

>100_bases
GATATTGCTAAAAATAGATCAAACAAAAGATAGATTACAATTCATAGTTGATTAAATATTAAAGCTAGACTATATAAAAG
TTTGGTGCTTTTTTAAATTT

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MFPKLLHMKNSQSSKTKAKIWVVENNNFVTHSDQLATEEPLEIRLNYPKQTIAVTMRTPGADFDLAAGFLYSEGVIKNQE
DIAKISYCVDPKVDGKQRQNIINVSLKSELNPNLTTLERHFLTTSACGVCGKASIESLQIKGFSAIPLGLEVSAEIIYSL
PDKLNTAQRVFKSTGGLHAAGLFNSEGKLLKLREDVGRHNALDKLIGSEFLAGQLPLNNLMVMVSGRSSFEILQKCITAG
LPIVCAVSAPSSLAVEIAKRFNITLVGFLRGRKFNIYSGVERIK

Sequences:

>Translated_284_residues
MFPKLLHMKNSQSSKTKAKIWVVENNNFVTHSDQLATEEPLEIRLNYPKQTIAVTMRTPGADFDLAAGFLYSEGVIKNQE
DIAKISYCVDPKVDGKQRQNIINVSLKSELNPNLTTLERHFLTTSACGVCGKASIESLQIKGFSAIPLGLEVSAEIIYSL
PDKLNTAQRVFKSTGGLHAAGLFNSEGKLLKLREDVGRHNALDKLIGSEFLAGQLPLNNLMVMVSGRSSFEILQKCITAG
LPIVCAVSAPSSLAVEIAKRFNITLVGFLRGRKFNIYSGVERIK
>Mature_284_residues
MFPKLLHMKNSQSSKTKAKIWVVENNNFVTHSDQLATEEPLEIRLNYPKQTIAVTMRTPGADFDLAAGFLYSEGVIKNQE
DIAKISYCVDPKVDGKQRQNIINVSLKSELNPNLTTLERHFLTTSACGVCGKASIESLQIKGFSAIPLGLEVSAEIIYSL
PDKLNTAQRVFKSTGGLHAAGLFNSEGKLLKLREDVGRHNALDKLIGSEFLAGQLPLNNLMVMVSGRSSFEILQKCITAG
LPIVCAVSAPSSLAVEIAKRFNITLVGFLRGRKFNIYSGVERIK

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=254, Percent_Identity=35.0393700787402, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31139; Mature: 31139

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPKLLHMKNSQSSKTKAKIWVVENNNFVTHSDQLATEEPLEIRLNYPKQTIAVTMRTPG
CCCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCCCEEEEECCCCEEEEEEEECCC
ADFDLAAGFLYSEGVIKNQEDIAKISYCVDPKVDGKQRQNIINVSLKSELNPNLTTLERH
CCCHHHHHHHCCCCCCCCHHHHHHEEEEECCCCCCHHHCCEEEEEEECCCCCCHHHHHHH
FLTTSACGVCGKASIESLQIKGFSAIPLGLEVSAEIIYSLPDKLNTAQRVFKSTGGLHAA
HHHHHHCCCCCCCCCCEEEECCCEECCCCCCHHHHHEECCCCCCHHHHHHHHHCCCEEEE
GLFNSEGKLLKLREDVGRHNALDKLIGSEFLAGQLPLNNLMVMVSGRSSFEILQKCITAG
EEECCCCCEEEEHHHHCHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCC
LPIVCAVSAPSSLAVEIAKRFNITLVGFLRGRKFNIYSGVERIK
CCEEEEECCCCHHHHHHHHHCCEEEEEEECCCEEEHHHHHHHCC
>Mature Secondary Structure
MFPKLLHMKNSQSSKTKAKIWVVENNNFVTHSDQLATEEPLEIRLNYPKQTIAVTMRTPG
CCCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCCCEEEEECCCCEEEEEEEECCC
ADFDLAAGFLYSEGVIKNQEDIAKISYCVDPKVDGKQRQNIINVSLKSELNPNLTTLERH
CCCHHHHHHHCCCCCCCCHHHHHHEEEEECCCCCCHHHCCEEEEEEECCCCCCHHHHHHH
FLTTSACGVCGKASIESLQIKGFSAIPLGLEVSAEIIYSLPDKLNTAQRVFKSTGGLHAA
HHHHHHCCCCCCCCCCEEEECCCEECCCCCCHHHHHEECCCCCCHHHHHHHHHCCCEEEE
GLFNSEGKLLKLREDVGRHNALDKLIGSEFLAGQLPLNNLMVMVSGRSSFEILQKCITAG
EEECCCCCEEEEHHHHCHHHHHHHHHCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCC
LPIVCAVSAPSSLAVEIAKRFNITLVGFLRGRKFNIYSGVERIK
CCEEEEECCCCHHHHHHHHHCCEEEEEEECCCEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]