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The map label for this gene is 113474284

Identifier: 113474284

GI number: 113474284

Start: 638761

End: 639687

Strand: Direct

Name: 113474284

Synonym: Tery_0407

Alternate gene names: NA

Gene position: 638761-639687 (Clockwise)

Preceding gene: 113474283

Following gene: 113474288

Centisome position: 8.24

GC content: 32.04

Gene sequence:

>927_bases
ATGAAATCAGAAATTTTAACCCTCGAAAAAAAAGGCACAAAAATCAAAAATATCCAAGTAACAAAAGTAGTTGATGGTGA
TACAATTAAAGTCCTATTGAATAATAAGCGAGAATTTATTAGGCTTGATTATGTTGATGCGGAAGAAAGTTATTCTGAAT
ATTCCAAACCTGTTACAGAAATTGGAAAACAAGCAGCAGAAATGGCAATACAATACTTCACATCACCTAACGGTGAACTT
GCCGAAGTTGATATTGAATTTGATACAGATGAACCGACAGAGAATTGTTTAGAAAAGTATCGTGACCATCAAGGTCGCTT
AATCGCTTATGTACATAAAAATGGTGAAAACTTTAATGTTAAACTAATTAAAGAAGGATGGAGTCCCTATTTTATTAAAT
ATGGATATTCTCGATTATATCATCAAGAAATGATGGTAGCAGAAACAGAAGCTCAAGCAAATAGTCTTGGTGTTTGGAGT
TCTCAAATAAATAAAGGAAAACGCAAAAGGAATTATAATTTACTGGTACCTTGGTGGACATTAAGAGCTTCCATTATAGA
AAATTATCGTAGTTATGGAATAGCTGCAGGAGTCCTAGAAGTTAGACTAGATTTTCCGAAAATTTTAGCTGCAGCAAAGA
TTGGAGAGTATATTACAGTTTTCTTTGATTTACAGAATGGAGTTTCTAAGTGGTTAGATAATGGTGCTTTAATTTACGAT
GGAACGAAAGATCATCGTTTAAAGTTATGGATTCCAGATACTAATAGTAGAGAAATGAAGCCATTATTACAGCTGTTAAA
AAATCGTTATTTTGGTTTATCTAGAGGATATGTTTATATTAGTGGACAAGTAAATATGTATCGGGATAAACCAGAAATTA
TCCTTTCTGATATTAAACAATTATCAGATTTTCCTCCTACAGCTTGA

Upstream 100 bases:

>100_bases
TCAATCTAGGGAAATAATCATAAATTCCCGAGGAAAAAAAATACTGATAAATGAAGTTTTATGCTTAAATTCTTACCTTT
TTACTTAAATATTAATAACA

Downstream 100 bases:

>100_bases
GGATTATTATGAGGATAAATTATAGTTACAATAACTAAGGTAGGAGCATAATATTATTGGACTCCTACAAAGTTTTGCTC
TGATAATAATCATTGAGAAT

Product: nuclease

Products: NA

Alternate protein names: Micrococcal Nuclease; Thermonuclease; Nuclease Domain-Containing Protein

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKSEILTLEKKGTKIKNIQVTKVVDGDTIKVLLNNKREFIRLDYVDAEESYSEYSKPVTEIGKQAAEMAIQYFTSPNGEL
AEVDIEFDTDEPTENCLEKYRDHQGRLIAYVHKNGENFNVKLIKEGWSPYFIKYGYSRLYHQEMMVAETEAQANSLGVWS
SQINKGKRKRNYNLLVPWWTLRASIIENYRSYGIAAGVLEVRLDFPKILAAAKIGEYITVFFDLQNGVSKWLDNGALIYD
GTKDHRLKLWIPDTNSREMKPLLQLLKNRYFGLSRGYVYISGQVNMYRDKPEIILSDIKQLSDFPPTA

Sequences:

>Translated_308_residues
MKSEILTLEKKGTKIKNIQVTKVVDGDTIKVLLNNKREFIRLDYVDAEESYSEYSKPVTEIGKQAAEMAIQYFTSPNGEL
AEVDIEFDTDEPTENCLEKYRDHQGRLIAYVHKNGENFNVKLIKEGWSPYFIKYGYSRLYHQEMMVAETEAQANSLGVWS
SQINKGKRKRNYNLLVPWWTLRASIIENYRSYGIAAGVLEVRLDFPKILAAAKIGEYITVFFDLQNGVSKWLDNGALIYD
GTKDHRLKLWIPDTNSREMKPLLQLLKNRYFGLSRGYVYISGQVNMYRDKPEIILSDIKQLSDFPPTA
>Mature_308_residues
MKSEILTLEKKGTKIKNIQVTKVVDGDTIKVLLNNKREFIRLDYVDAEESYSEYSKPVTEIGKQAAEMAIQYFTSPNGEL
AEVDIEFDTDEPTENCLEKYRDHQGRLIAYVHKNGENFNVKLIKEGWSPYFIKYGYSRLYHQEMMVAETEAQANSLGVWS
SQINKGKRKRNYNLLVPWWTLRASIIENYRSYGIAAGVLEVRLDFPKILAAAKIGEYITVFFDLQNGVSKWLDNGALIYD
GTKDHRLKLWIPDTNSREMKPLLQLLKNRYFGLSRGYVYISGQVNMYRDKPEIILSDIKQLSDFPPTA

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35594; Mature: 35594

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEILTLEKKGTKIKNIQVTKVVDGDTIKVLLNNKREFIRLDYVDAEESYSEYSKPVTE
CCCCEEEEECCCCEEEEEEEEEEECCCEEEEEECCCCEEEEEEEECCHHHHHHHCCHHHH
IGKQAAEMAIQYFTSPNGELAEVDIEFDTDEPTENCLEKYRDHQGRLIAYVHKNGENFNV
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEE
KLIKEGWSPYFIKYGYSRLYHQEMMVAETEAQANSLGVWSSQINKGKRKRNYNLLVPWWT
EEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHCCCEEEEEHHH
LRASIIENYRSYGIAAGVLEVRLDFPKILAAAKIGEYITVFFDLQNGVSKWLDNGALIYD
HHHHHHHHHHHCCHHEEEEEEEECCHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCEEEEE
GTKDHRLKLWIPDTNSREMKPLLQLLKNRYFGLSRGYVYISGQVNMYRDKPEIILSDIKQ
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEECCEEEEECCEEEECCCHHHHHHHHHH
LSDFPPTA
HCCCCCCC
>Mature Secondary Structure
MKSEILTLEKKGTKIKNIQVTKVVDGDTIKVLLNNKREFIRLDYVDAEESYSEYSKPVTE
CCCCEEEEECCCCEEEEEEEEEEECCCEEEEEECCCCEEEEEEEECCHHHHHHHCCHHHH
IGKQAAEMAIQYFTSPNGELAEVDIEFDTDEPTENCLEKYRDHQGRLIAYVHKNGENFNV
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEE
KLIKEGWSPYFIKYGYSRLYHQEMMVAETEAQANSLGVWSSQINKGKRKRNYNLLVPWWT
EEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHCCCEEEEEHHH
LRASIIENYRSYGIAAGVLEVRLDFPKILAAAKIGEYITVFFDLQNGVSKWLDNGALIYD
HHHHHHHHHHHCCHHEEEEEEEECCHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCEEEEE
GTKDHRLKLWIPDTNSREMKPLLQLLKNRYFGLSRGYVYISGQVNMYRDKPEIILSDIKQ
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEECCEEEEECCEEEECCCHHHHHHHHHH
LSDFPPTA
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA