| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is mco [H]
Identifier: 113474240
GI number: 113474240
Start: 551971
End: 553365
Strand: Direct
Name: mco [H]
Synonym: Tery_0359
Alternate gene names: 113474240
Gene position: 551971-553365 (Clockwise)
Preceding gene: 113474237
Following gene: 113474241
Centisome position: 7.12
GC content: 37.13
Gene sequence:
>1395_bases ATGGCAACTTTAATCACTCAATGTAATATAAATAATACTCAAAAAAATCAACAACTTATATCATCATACCCTCAAATACA TCAGAGCCAAGATGGAATTCTAGAAATTGATTTGACAGCTAATATTAGTCAAATAAATCTGGGAAATAAACAAGCTTATG TATTAAATTATAACGGACAAATTCCCGGACCAAGATTAGAAGTAAAACCAAGAGATACAATTAGGATTAATTTCACTAAC AATTTACCCCAACCTACAAATATTCATTATCACGGACTACATATTCCCATGACTGGAAATGCTGATAACGTATTTCTGAA TATTTCTCCAGGCGATCGCTTGACATATCAGTTTCAAATTCCTGAAAATCACCATGCTGGAATGTTTTGGTATCATCCAC ATCTCCATGGTTTAGTAGCAGAACAAATTTTTGGGGGGTTAGCTGGATTATTTATTGTCCGTGGAGAGCTCGATGAAATT CCCGAAGTAAAAGCTGCTTCAGAACAATTTTTAGTGTTGCAGGATTTTGCCCTAGACCAAAAAGGAAATATACTCCCATC TCATGAGCTTTCAATAATGACAGGAAGGCAAGGAAATTTGATCACTGCTAACGGTCAGTCTAACCCTAAATTAACCATTC CCCCTCAAAATTTATTAAGAATTCGTATTCTTAATGCTTCAAGTTCCAGATTTTATCGGTTATCTTTAGAAGAACACCCA TTTTATTTAATAGCTACTGATGGAGGAGCATTAGCTGAACCTGTAGAAATGTCAGAACTATTATTGACTCCTGGAGAACG TGCAGATGTATTAGTCCAAGGTAACCGAGAGCCAGGAAAATATCGCTTGTTGAATTTACCTTATGAACGAGTGGGTATTG GTATGATGGGGAGAAATGTATCTGAAAGTCAACCACAAGTTTTAGCAACAGTGAGTTATGACCAACAGTCCACTGCTGTG CCACTGCCAACCAAACTCATCCCTGTCCCAGCATTGCCCGAACCTCAAAAAGTACGTCGTTTTCAGATGAACCATGGCAT GATACCTGGTCAAGGGATGGCATTTTTGTTTAATGGTCAGCCATATCAACCAGAAAGAATTGATACTCAAGTTCAGCTCA ATACCGTTGAAGACTGGGAATTAATTAACACAGGCATAATGGATCATCCCTTTCATATTCATAGCAATGCTTTTCAAGTT TTGAGTCGGAATGGCAAACCAGAACCCTATCGTGCCTGGAAAGATGTAGTCTTAGTCAGACAGGGAGAAACAGTTTTAAT TCGGATGCCATTACAAGATTTTGCTGGAAAAACTGTTTATCATTGTCATATTCTTGACCACGAAGATTTAGGAATGATAG GAAATTTGGAAATTAAAGCAAGACTTTCTATTTAA
Upstream 100 bases:
>100_bases ATTGGCTAAAATAAAATGTTAAATCAAATATAAAATTCCCAAAATATTAATTGTGAAAAAAATTAATCGAAGAAAATTTT TCATCCTAAGTTCCAGTGCG
Downstream 100 bases:
>100_bases CCAGAAAATTTATCATTACAATAGAGTACTATAGATTATTTAAGGTAATAATTATGAAAAAAGTTTTCTCTAATTGGATA AAGTCTTTAATTGCTGGTGT
Product: multicopper oxidase, type 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MATLITQCNINNTQKNQQLISSYPQIHQSQDGILEIDLTANISQINLGNKQAYVLNYNGQIPGPRLEVKPRDTIRINFTN NLPQPTNIHYHGLHIPMTGNADNVFLNISPGDRLTYQFQIPENHHAGMFWYHPHLHGLVAEQIFGGLAGLFIVRGELDEI PEVKAASEQFLVLQDFALDQKGNILPSHELSIMTGRQGNLITANGQSNPKLTIPPQNLLRIRILNASSSRFYRLSLEEHP FYLIATDGGALAEPVEMSELLLTPGERADVLVQGNREPGKYRLLNLPYERVGIGMMGRNVSESQPQVLATVSYDQQSTAV PLPTKLIPVPALPEPQKVRRFQMNHGMIPGQGMAFLFNGQPYQPERIDTQVQLNTVEDWELINTGIMDHPFHIHSNAFQV LSRNGKPEPYRAWKDVVLVRQGETVLIRMPLQDFAGKTVYHCHILDHEDLGMIGNLEIKARLSI
Sequences:
>Translated_464_residues MATLITQCNINNTQKNQQLISSYPQIHQSQDGILEIDLTANISQINLGNKQAYVLNYNGQIPGPRLEVKPRDTIRINFTN NLPQPTNIHYHGLHIPMTGNADNVFLNISPGDRLTYQFQIPENHHAGMFWYHPHLHGLVAEQIFGGLAGLFIVRGELDEI PEVKAASEQFLVLQDFALDQKGNILPSHELSIMTGRQGNLITANGQSNPKLTIPPQNLLRIRILNASSSRFYRLSLEEHP FYLIATDGGALAEPVEMSELLLTPGERADVLVQGNREPGKYRLLNLPYERVGIGMMGRNVSESQPQVLATVSYDQQSTAV PLPTKLIPVPALPEPQKVRRFQMNHGMIPGQGMAFLFNGQPYQPERIDTQVQLNTVEDWELINTGIMDHPFHIHSNAFQV LSRNGKPEPYRAWKDVVLVRQGETVLIRMPLQDFAGKTVYHCHILDHEDLGMIGNLEIKARLSI >Mature_463_residues ATLITQCNINNTQKNQQLISSYPQIHQSQDGILEIDLTANISQINLGNKQAYVLNYNGQIPGPRLEVKPRDTIRINFTNN LPQPTNIHYHGLHIPMTGNADNVFLNISPGDRLTYQFQIPENHHAGMFWYHPHLHGLVAEQIFGGLAGLFIVRGELDEIP EVKAASEQFLVLQDFALDQKGNILPSHELSIMTGRQGNLITANGQSNPKLTIPPQNLLRIRILNASSSRFYRLSLEEHPF YLIATDGGALAEPVEMSELLLTPGERADVLVQGNREPGKYRLLNLPYERVGIGMMGRNVSESQPQVLATVSYDQQSTAVP LPTKLIPVPALPEPQKVRRFQMNHGMIPGQGMAFLFNGQPYQPERIDTQVQLNTVEDWELINTGIMDHPFHIHSNAFQVL SRNGKPEPYRAWKDVVLVRQGETVLIRMPLQDFAGKTVYHCHILDHEDLGMIGNLEIKARLSI
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=486, Percent_Identity=29.6296296296296, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI1789394, Length=425, Percent_Identity=28.7058823529412, Blast_Score=127, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323703, Length=471, Percent_Identity=25.6900212314225, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24650186, Length=256, Percent_Identity=28.515625, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI18859919, Length=265, Percent_Identity=28.6792452830189, Blast_Score=86, Evalue=7e-17,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 52141; Mature: 52010
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLITQCNINNTQKNQQLISSYPQIHQSQDGILEIDLTANISQINLGNKQAYVLNYNGQ CCEEEEEECCCCCHHHHHHHHHCHHHHCCCCCEEEEEEECCEEEEECCCCEEEEEEECCC IPGPRLEVKPRDTIRINFTNNLPQPTNIHYHGLHIPMTGNADNVFLNISPGDRLTYQFQI CCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCEEEEEEEC PENHHAGMFWYHPHLHGLVAEQIFGGLAGLFIVRGELDEIPEVKAASEQFLVLQDFALDQ CCCCCCCEEEECCCHHHHHHHHHHHCCEEEEEEECCHHCCCCCCCCCCEEEEEEEECCCC KGNILPSHELSIMTGRQGNLITANGQSNPKLTIPPQNLLRIRILNASSSRFYRLSLEEHP CCCCCCCCCEEEEECCCCCEEEECCCCCCEEEECCCCEEEEEEEECCCCEEEEEEECCCC FYLIATDGGALAEPVEMSELLLTPGERADVLVQGNREPGKYRLLNLPYERVGIGMMGRNV EEEEEECCCCCCCCCCCHHEEECCCCCCEEEEECCCCCCCEEEEECCHHHHCEEEECCCC SESQPQVLATVSYDQQSTAVPLPTKLIPVPALPEPQKVRRFQMNHGMIPGQGMAFLFNGQ CCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCC PYQPERIDTQVQLNTVEDWELINTGIMDHPFHIHSNAFQVLSRNGKPEPYRAWKDVVLVR CCCCCCCCCEEEEEECCCCEEHHCCCCCCCEEECCCHHHHHHCCCCCCHHHHCCEEEEEE QGETVLIRMPLQDFAGKTVYHCHILDHEDLGMIGNLEIKARLSI CCCEEEEEECHHHHCCCEEEEEEEECCCCCCEEECEEEEEEECC >Mature Secondary Structure ATLITQCNINNTQKNQQLISSYPQIHQSQDGILEIDLTANISQINLGNKQAYVLNYNGQ CEEEEEECCCCCHHHHHHHHHCHHHHCCCCCEEEEEEECCEEEEECCCCEEEEEEECCC IPGPRLEVKPRDTIRINFTNNLPQPTNIHYHGLHIPMTGNADNVFLNISPGDRLTYQFQI CCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCEEEEEEEC PENHHAGMFWYHPHLHGLVAEQIFGGLAGLFIVRGELDEIPEVKAASEQFLVLQDFALDQ CCCCCCCEEEECCCHHHHHHHHHHHCCEEEEEEECCHHCCCCCCCCCCEEEEEEEECCCC KGNILPSHELSIMTGRQGNLITANGQSNPKLTIPPQNLLRIRILNASSSRFYRLSLEEHP CCCCCCCCCEEEEECCCCCEEEECCCCCCEEEECCCCEEEEEEEECCCCEEEEEEECCCC FYLIATDGGALAEPVEMSELLLTPGERADVLVQGNREPGKYRLLNLPYERVGIGMMGRNV EEEEEECCCCCCCCCCCHHEEECCCCCCEEEEECCCCCCCEEEEECCHHHHCEEEECCCC SESQPQVLATVSYDQQSTAVPLPTKLIPVPALPEPQKVRRFQMNHGMIPGQGMAFLFNGQ CCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCC PYQPERIDTQVQLNTVEDWELINTGIMDHPFHIHSNAFQVLSRNGKPEPYRAWKDVVLVR CCCCCCCCCEEEEEECCCCEEHHCCCCCCCEEECCCHHHHHHCCCCCCHHHHCCEEEEEE QGETVLIRMPLQDFAGKTVYHCHILDHEDLGMIGNLEIKARLSI CCCEEEEEECHHHHCCCEEEEEEEECCCCCCEEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]