| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474237
Identifier: 113474237
GI number: 113474237
Start: 549606
End: 550889
Strand: Direct
Name: 113474237
Synonym: Tery_0356
Alternate gene names: NA
Gene position: 549606-550889 (Clockwise)
Preceding gene: 113474236
Following gene: 113474240
Centisome position: 7.09
GC content: 36.14
Gene sequence:
>1284_bases ATGGTAACAGATATATTCCAGAATAAACCCCTTCCTAACTGGGAAGAATTACTACAAGTTGCCCAACAAAATACTACGGC AAAATGGATATTAAGAACAGATAAAAGTCCTAGCACTGCAACAATATCTAGTTATATTGCTCGACTAAACCCTGAGGAAA AACCCTCTGTTTTGCTTTATAGAGATAATAATGCTTGGTGTCCTTTTTGTGAAAGAGTTTGGTTTGCGTTAGAAGAAAAA CAAATCCCTTTTGAAGTTGAGTTAATTAACTTAGCAGATAAACCACAATGGTACAAGGATATGGTGCCAACCGGGTTAGT TCCGGCAGTGAAAATTGAAGGAGAGTTAGTCTATGAGTCGAAAAATATTTTACTTGCTTTAGAAAATAAATTTGATAGGC TTCCCCTATTACCTAAGGAACCCCAAGAAAGGTCTGTAGCTTTAAATATGATAGAAGCTTTTGACAGTAATGGTTTAGTT AAATCAGGATATGAGTTTCTCTTTAATTCTGTGAAATCAAAAGAAATAACACCTGAAGAAAAAGAGGCACAGCTACTGAA TTTGCAAACAATTTTTGAGACTAGGTTAGACCAGTTGGAAGAAACATTAAGTCAGTATCCTGGTGCTTATTTTTTGCACG AGTTTAGTTTGGTGGATATAATATATACTCCTGGTATTACGAGATTAGCAGCTAATTTACCTGTATTTCGGGGGTATTCT ATATATAATAACGATCGCTTTGCGAGAATTAATCAATGGTTGACGGCGATCAATCAGCGTCCGGCTTATCAACATATAAA ACCAAATTCTCAAACTAATAATTTGATCATACAAAAAATATTTCATTTGCCGGCTATTTACAACAGTAAATCAGAACCTC AAGCAAAATTTGAAAGTCAGGAACAAGACTATCGGATGGAGGCAGCCGGGAGATTAAGTAGTAACTACAAAACTGTTGTT GCTGATATTCTCAAAAATTCGGGAATTCAAACATGGGTGAGTCAGGAGAGTTTACCAAAAATTGAATTGGTTATTGACTT TTACTTGAGACGTTTAGTTTATTCTTTAATTGAGGGGGGCGTCCCATCATTTTTTACTCACTCAATTGATGCCAAAACTG AACAACACAATGAAGTCAAAGAGATAAATTCTGCTGATGCTGCCCTTGGAGCGATCGCTCTAGCTTTTCTCAGAAATAGA GTTTGTGTACCCCGTGACATGAGTGCAAATGCTGCAGTGGCTTTTCAAACAGCAATTGATACTATGTTGTCTTGTCTCTA TTAA
Upstream 100 bases:
>100_bases TATTTGAATGTGACTCCTGAATCCTAATAAATATTTTAGTCATTTCTAACAAATATTTATCACATTTAGTCTAATAAATT AGAAAGGATAAAATTCAGCA
Downstream 100 bases:
>100_bases ATTTATCTTCAAACTAAAAGTTGAACAAATAGCTTCTTCAGGACTTACACAGGTGAACCTAGAGACCGAATTTTTTCATT AATATTTATGATTAAAAACA
Product: glutaredoxin
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain Protein; Glutaredoxin-Like Domain-Containing Protein; Glutaredoxin; Glutathione S-Transferase N-Terminal Domain Protein
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MVTDIFQNKPLPNWEELLQVAQQNTTAKWILRTDKSPSTATISSYIARLNPEEKPSVLLYRDNNAWCPFCERVWFALEEK QIPFEVELINLADKPQWYKDMVPTGLVPAVKIEGELVYESKNILLALENKFDRLPLLPKEPQERSVALNMIEAFDSNGLV KSGYEFLFNSVKSKEITPEEKEAQLLNLQTIFETRLDQLEETLSQYPGAYFLHEFSLVDIIYTPGITRLAANLPVFRGYS IYNNDRFARINQWLTAINQRPAYQHIKPNSQTNNLIIQKIFHLPAIYNSKSEPQAKFESQEQDYRMEAAGRLSSNYKTVV ADILKNSGIQTWVSQESLPKIELVIDFYLRRLVYSLIEGGVPSFFTHSIDAKTEQHNEVKEINSADAALGAIALAFLRNR VCVPRDMSANAAVAFQTAIDTMLSCLY
Sequences:
>Translated_427_residues MVTDIFQNKPLPNWEELLQVAQQNTTAKWILRTDKSPSTATISSYIARLNPEEKPSVLLYRDNNAWCPFCERVWFALEEK QIPFEVELINLADKPQWYKDMVPTGLVPAVKIEGELVYESKNILLALENKFDRLPLLPKEPQERSVALNMIEAFDSNGLV KSGYEFLFNSVKSKEITPEEKEAQLLNLQTIFETRLDQLEETLSQYPGAYFLHEFSLVDIIYTPGITRLAANLPVFRGYS IYNNDRFARINQWLTAINQRPAYQHIKPNSQTNNLIIQKIFHLPAIYNSKSEPQAKFESQEQDYRMEAAGRLSSNYKTVV ADILKNSGIQTWVSQESLPKIELVIDFYLRRLVYSLIEGGVPSFFTHSIDAKTEQHNEVKEINSADAALGAIALAFLRNR VCVPRDMSANAAVAFQTAIDTMLSCLY >Mature_427_residues MVTDIFQNKPLPNWEELLQVAQQNTTAKWILRTDKSPSTATISSYIARLNPEEKPSVLLYRDNNAWCPFCERVWFALEEK QIPFEVELINLADKPQWYKDMVPTGLVPAVKIEGELVYESKNILLALENKFDRLPLLPKEPQERSVALNMIEAFDSNGLV KSGYEFLFNSVKSKEITPEEKEAQLLNLQTIFETRLDQLEETLSQYPGAYFLHEFSLVDIIYTPGITRLAANLPVFRGYS IYNNDRFARINQWLTAINQRPAYQHIKPNSQTNNLIIQKIFHLPAIYNSKSEPQAKFESQEQDYRMEAAGRLSSNYKTVV ADILKNSGIQTWVSQESLPKIELVIDFYLRRLVYSLIEGGVPSFFTHSIDAKTEQHNEVKEINSADAALGAIALAFLRNR VCVPRDMSANAAVAFQTAIDTMLSCLY
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4758484, Length=203, Percent_Identity=29.064039408867, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI300360534, Length=203, Percent_Identity=29.064039408867, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI21355775, Length=203, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355779, Length=214, Percent_Identity=26.6355140186916, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48830; Mature: 48830
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTDIFQNKPLPNWEELLQVAQQNTTAKWILRTDKSPSTATISSYIARLNPEEKPSVLLY CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE RDNNAWCPFCERVWFALEEKQIPFEVELINLADKPQWYKDMVPTGLVPAVKIEGELVYES ECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEEECCEEEEEC KNILLALENKFDRLPLLPKEPQERSVALNMIEAFDSNGLVKSGYEFLFNSVKSKEITPEE CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCH KEAQLLNLQTIFETRLDQLEETLSQYPGAYFLHEFSLVDIIYTPGITRLAANLPVFRGYS HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEEEECCCHHHHHHCCCCEECEE IYNNDRFARINQWLTAINQRPAYQHIKPNSQTNNLIIQKIFHLPAIYNSKSEPQAKFESQ EECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHCCC EQDYRMEAAGRLSSNYKTVVADILKNSGIQTWVSQESLPKIELVIDFYLRRLVYSLIEGG HHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCC VPSFFTHSIDAKTEQHNEVKEINSADAALGAIALAFLRNRVCVPRDMSANAAVAFQTAID CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH TMLSCLY HHHHHCC >Mature Secondary Structure MVTDIFQNKPLPNWEELLQVAQQNTTAKWILRTDKSPSTATISSYIARLNPEEKPSVLLY CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE RDNNAWCPFCERVWFALEEKQIPFEVELINLADKPQWYKDMVPTGLVPAVKIEGELVYES ECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCCCCCCCCEEEECCEEEEEC KNILLALENKFDRLPLLPKEPQERSVALNMIEAFDSNGLVKSGYEFLFNSVKSKEITPEE CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCH KEAQLLNLQTIFETRLDQLEETLSQYPGAYFLHEFSLVDIIYTPGITRLAANLPVFRGYS HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEEEECCCHHHHHHCCCCEECEE IYNNDRFARINQWLTAINQRPAYQHIKPNSQTNNLIIQKIFHLPAIYNSKSEPQAKFESQ EECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHCCC EQDYRMEAAGRLSSNYKTVVADILKNSGIQTWVSQESLPKIELVIDFYLRRLVYSLIEGG HHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCC VPSFFTHSIDAKTEQHNEVKEINSADAALGAIALAFLRNRVCVPRDMSANAAVAFQTAID CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH TMLSCLY HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA