Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474241

Identifier: 113474241

GI number: 113474241

Start: 553419

End: 553976

Strand: Direct

Name: 113474241

Synonym: Tery_0360

Alternate gene names: NA

Gene position: 553419-553976 (Clockwise)

Preceding gene: 113474240

Following gene: 113474244

Centisome position: 7.14

GC content: 38.35

Gene sequence:

>558_bases
ATGAAAAAAGTTTTCTCTAATTGGATAAAGTCTTTAATTGCTGGTGTTGCAGTTGCTGGAGTTTTAGGGGCAACATATTG
GTATTTTGTCGGTTTACCAGAAAATCCTACCTTGAGTACAAAAACTCAGACTGTTCTTAACTCTAGTTTATCTACCACAG
ACTTAGCACCACCAGTCCTTAATGTCACTGTCTACCGTACTCCTACTTGCGGATGTTGTAAGGGTTGGGTGGAACATATC
AAGCAAAATGGCTTTCAAATAACTGATATTGTCAAACCTGAGTCAGAAATTAAAACTATTCGCCAGAAATATAATTTACC
CTCAGATTTAACATCTTGTCATACCAGTGAAATTGCTGGCTATCTTGTAGAAGGTCATGTTCCCGTGGCAGATGTCAAAA
GTTTAATCGCCCAGAAACCAGATGTTGCTGGAATTAGCGTTCCTGGAATGCCCATTGGTACTCCTGGCATGGAAATGGGC
GATCGCAAACAATCTTTTGATGTATTTACCTTTGAAAAAGATGGTCAGACTAAAGTTTTTAATTCCTATAAATTCTAG

Upstream 100 bases:

>100_bases
TAGGAATGATAGGAAATTTGGAAATTAAAGCAAGACTTTCTATTTAACCAGAAAATTTATCATTACAATAGAGTACTATA
GATTATTTAAGGTAATAATT

Downstream 100 bases:

>100_bases
AATAGGGAATAGAGAATAGTTAGAAGTAATTGATACTTTTTCGATGGTAATTAATTTTATCTTTGATTTTAGGAGAGTTT
TAATAAAATAAATTAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKKVFSNWIKSLIAGVAVAGVLGATYWYFVGLPENPTLSTKTQTVLNSSLSTTDLAPPVLNVTVYRTPTCGCCKGWVEHI
KQNGFQITDIVKPESEIKTIRQKYNLPSDLTSCHTSEIAGYLVEGHVPVADVKSLIAQKPDVAGISVPGMPIGTPGMEMG
DRKQSFDVFTFEKDGQTKVFNSYKF

Sequences:

>Translated_185_residues
MKKVFSNWIKSLIAGVAVAGVLGATYWYFVGLPENPTLSTKTQTVLNSSLSTTDLAPPVLNVTVYRTPTCGCCKGWVEHI
KQNGFQITDIVKPESEIKTIRQKYNLPSDLTSCHTSEIAGYLVEGHVPVADVKSLIAQKPDVAGISVPGMPIGTPGMEMG
DRKQSFDVFTFEKDGQTKVFNSYKF
>Mature_185_residues
MKKVFSNWIKSLIAGVAVAGVLGATYWYFVGLPENPTLSTKTQTVLNSSLSTTDLAPPVLNVTVYRTPTCGCCKGWVEHI
KQNGFQITDIVKPESEIKTIRQKYNLPSDLTSCHTSEIAGYLVEGHVPVADVKSLIAQKPDVAGISVPGMPIGTPGMEMG
DRKQSFDVFTFEKDGQTKVFNSYKF

Specific function: Unknown

COG id: COG3019

COG function: function code R; Predicted metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20207; Mature: 20207

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVFSNWIKSLIAGVAVAGVLGATYWYFVGLPENPTLSTKTQTVLNSSLSTTDLAPPVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEE
NVTVYRTPTCGCCKGWVEHIKQNGFQITDIVKPESEIKTIRQKYNLPSDLTSCHTSEIAG
EEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
YLVEGHVPVADVKSLIAQKPDVAGISVPGMPIGTPGMEMGDRKQSFDVFTFEKDGQTKVF
HHEECCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECC
NSYKF
CCCCC
>Mature Secondary Structure
MKKVFSNWIKSLIAGVAVAGVLGATYWYFVGLPENPTLSTKTQTVLNSSLSTTDLAPPVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEE
NVTVYRTPTCGCCKGWVEHIKQNGFQITDIVKPESEIKTIRQKYNLPSDLTSCHTSEIAG
EEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
YLVEGHVPVADVKSLIAQKPDVAGISVPGMPIGTPGMEMGDRKQSFDVFTFEKDGQTKVF
HHEECCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECC
NSYKF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA