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The map label for this gene is yjjU [H]

Identifier: 110835366

GI number: 110835366

Start: 2841012

End: 2841857

Strand: Reverse

Name: yjjU [H]

Synonym: ABO_2505

Alternate gene names: 110835366

Gene position: 2841857-2841012 (Counterclockwise)

Preceding gene: 110835375

Following gene: 110835362

Centisome position: 91.08

GC content: 53.43

Gene sequence:

>846_bases
ATGTCACAGCGTGCGTTGGTAGTGGAAGGCGGTGCCATGCGCGGTATTTTTGCTGCCGGGGTGTTGGATGCGTTTTTGGA
AAAAAAACATCAGGATTTCGATTTCGCCGTGGGCGCGTCTGCCGGCTCGACCAATCTGATCGGCTATCTGGCAGGTAATC
ATGGCCGCAGCCGTCAAGTGATCACCGACCATGCCTGTCGACCGGACTTTATCAACTGGTCACGTTTTATGTCGGGTGGA
CATTTGTGTGATGTGCACTGGTTGTGGCACCAGTCTCGCATAGACGTGCCGTTGAATTTGGAGAGACATTGGCAGGGAAA
TACTTCTCTGTGGGTAGTGACTACCTCGATAGAAGACGGGGCGCCGCGTTATTTTCAGACCCAGCCGAGTAATTTAGATG
AGGTAATCACCGCGTCCTGTTCTATTCCTTTTGCCTACCGAGACTTTCCCAAGGTGGCCGGCCACCCCATGACCGATGGC
GGGCTAGCGGATTCCATTCCGGTGCGTTGGGCTTACGAACAGGGCGCGCGGGATATCACCGTGGTGTTGTCCCGCCCTCA
GGGTTTCCGCAAACGCCCTAGTGCGTTGACGCCTTTATTAAAGCCTTGGGCTCGTGATATCCCCGCCTTTTATGAAGCCA
TGGCGAAACGTACAGATGTCTATAATAGAGCATTGGATTTTATTGACAGCCCGCCTGATGATTGTTGCCTCAATGTTATC
GCCCCACCGATGCACTTCCCGGTGAATCGGTTGACCACCAATGTGGAAAAATTGCAGCAAGGATATCAGCAGGGGCATCG
TGCGGGATTACAGTCGTTGGGGGTGGAGAAAGCAGTAGTGGGGTAA

Upstream 100 bases:

>100_bases
ACAGTAAGACTCTATTTCCCTTCTTTGGGAGGCCTTGGCATCGTTGTTGAACCGATTCAAGGACGTACAGCCCAGACCGG
TTCGAGGTGGAGGGAAAAGA

Downstream 100 bases:

>100_bases
TGTGCAAGCGCTTCACGCTGCAACAGGTTTTGCTTTCTACGTGGCGTAATCCTGCCAGGTCGAGCTAAAAGGTTTGGGCG
TGGTGTTTTGTGAGCCAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSQRALVVEGGAMRGIFAAGVLDAFLEKKHQDFDFAVGASAGSTNLIGYLAGNHGRSRQVITDHACRPDFINWSRFMSGG
HLCDVHWLWHQSRIDVPLNLERHWQGNTSLWVVTTSIEDGAPRYFQTQPSNLDEVITASCSIPFAYRDFPKVAGHPMTDG
GLADSIPVRWAYEQGARDITVVLSRPQGFRKRPSALTPLLKPWARDIPAFYEAMAKRTDVYNRALDFIDSPPDDCCLNVI
APPMHFPVNRLTTNVEKLQQGYQQGHRAGLQSLGVEKAVVG

Sequences:

>Translated_281_residues
MSQRALVVEGGAMRGIFAAGVLDAFLEKKHQDFDFAVGASAGSTNLIGYLAGNHGRSRQVITDHACRPDFINWSRFMSGG
HLCDVHWLWHQSRIDVPLNLERHWQGNTSLWVVTTSIEDGAPRYFQTQPSNLDEVITASCSIPFAYRDFPKVAGHPMTDG
GLADSIPVRWAYEQGARDITVVLSRPQGFRKRPSALTPLLKPWARDIPAFYEAMAKRTDVYNRALDFIDSPPDDCCLNVI
APPMHFPVNRLTTNVEKLQQGYQQGHRAGLQSLGVEKAVVG
>Mature_280_residues
SQRALVVEGGAMRGIFAAGVLDAFLEKKHQDFDFAVGASAGSTNLIGYLAGNHGRSRQVITDHACRPDFINWSRFMSGGH
LCDVHWLWHQSRIDVPLNLERHWQGNTSLWVVTTSIEDGAPRYFQTQPSNLDEVITASCSIPFAYRDFPKVAGHPMTDGG
LADSIPVRWAYEQGARDITVVLSRPQGFRKRPSALTPLLKPWARDIPAFYEAMAKRTDVYNRALDFIDSPPDDCCLNVIA
PPMHFPVNRLTTNVEKLQQGYQQGHRAGLQSLGVEKAVVG

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=270, Percent_Identity=31.4814814814815, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31230; Mature: 31099

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRALVVEGGAMRGIFAAGVLDAFLEKKHQDFDFAVGASAGSTNLIGYLAGNHGRSRQV
CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCCE
ITDHACRPDFINWSRFMSGGHLCDVHWLWHQSRIDVPLNLERHWQGNTSLWVVTTSIEDG
EECCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCHHCCCCCCEEEEEEECCCCC
APRYFQTQPSNLDEVITASCSIPFAYRDFPKVAGHPMTDGGLADSIPVRWAYEQGARDIT
CCCEEECCCCCHHHHHHHHCCCCCHHHCCHHHCCCCCCCCCCCCCCCEEEEHHCCCCEEE
VVLSRPQGFRKRPSALTPLLKPWARDIPAFYEAMAKRTDVYNRALDFIDSPPDDCCLNVI
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
APPMHFPVNRLTTNVEKLQQGYQQGHRAGLQSLGVEKAVVG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SQRALVVEGGAMRGIFAAGVLDAFLEKKHQDFDFAVGASAGSTNLIGYLAGNHGRSRQV
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCCE
ITDHACRPDFINWSRFMSGGHLCDVHWLWHQSRIDVPLNLERHWQGNTSLWVVTTSIEDG
EECCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCHHCCCCCCEEEEEEECCCCC
APRYFQTQPSNLDEVITASCSIPFAYRDFPKVAGHPMTDGGLADSIPVRWAYEQGARDIT
CCCEEECCCCCHHHHHHHHCCCCCHHHCCHHHCCCCCCCCCCCCCCCEEEEHHCCCCEEE
VVLSRPQGFRKRPSALTPLLKPWARDIPAFYEAMAKRTDVYNRALDFIDSPPDDCCLNVI
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
APPMHFPVNRLTTNVEKLQQGYQQGHRAGLQSLGVEKAVVG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]