| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835375
Identifier: 110835375
GI number: 110835375
Start: 2851212
End: 2851625
Strand: Reverse
Name: 110835375
Synonym: ABO_2514
Alternate gene names: NA
Gene position: 2851625-2851212 (Counterclockwise)
Preceding gene: 110835377
Following gene: 110835366
Centisome position: 91.39
GC content: 54.59
Gene sequence:
>414_bases GTGAAAGCGGTGATTCAAGAAGAGGATTCAGGCTGTGGTATAGCGGCTGTGGCCGCCTTGGCAGGTGTTAGCTATGGGGA GGCGAAGCGGCGGGCAAATGCTTTGGGGATTTATGCTCAGGACCCCGGTTTGTGGTCAGACACGGGTTATGTCTGCCGGT TATTAGAGGAATACGGGTTACATGCGTCTCCGCAAGAACAGCCATTTCAGGATTGGGCGGCCCTTCCTGATCGAGCCTTG TTGGCGATCAAGTGGCACCGGGAAAACGGCACACCCTTTTGGCATTGGGTGGTGTTTGTCCGCGACGGTGGGGACGCCTA TGTACTGGATTCCAAAAAAGCCCTGAAACAACACTGCCGCCGGGATTTTTGTCGCATAAAACCCAAATGGTTTATCCCCG TCCGTTCCGGGTAA
Upstream 100 bases:
>100_bases TGGGAATAGTTGGGCGAGGCGGTTGAGCATGAAGATCGCCTGTTCGTTGGGAAAGCGGCCAGTGTAAGCTGTCAGACGAA ATGACGCACAGGAGTAATCT
Downstream 100 bases:
>100_bases CCGTCATAATAACCGGTGTCATCTGGTGGGTTTCCGTTGTACTCAACGCAACGATGGGGTGGGCAATTTTTACTGTAAAA GGGGTATCGCTGGCGCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGLHASPQEQPFQDWAALPDRAL LAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCRRDFCRIKPKWFIPVRSG
Sequences:
>Translated_137_residues MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGLHASPQEQPFQDWAALPDRAL LAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCRRDFCRIKPKWFIPVRSG >Mature_137_residues MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGLHASPQEQPFQDWAALPDRAL LAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCRRDFCRIKPKWFIPVRSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15417; Mature: 15417
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGL CCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCC HASPQEQPFQDWAALPDRALLAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCR CCCCCCCCCHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCEEEECCHHHHHHHHH RDFCRIKPKWFIPVRSG HHHHCCCCCEEEEECCC >Mature Secondary Structure MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGL CCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCC HASPQEQPFQDWAALPDRALLAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCR CCCCCCCCCHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCEEEECCHHHHHHHHH RDFCRIKPKWFIPVRSG HHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA