Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835375

Identifier: 110835375

GI number: 110835375

Start: 2851212

End: 2851625

Strand: Reverse

Name: 110835375

Synonym: ABO_2514

Alternate gene names: NA

Gene position: 2851625-2851212 (Counterclockwise)

Preceding gene: 110835377

Following gene: 110835366

Centisome position: 91.39

GC content: 54.59

Gene sequence:

>414_bases
GTGAAAGCGGTGATTCAAGAAGAGGATTCAGGCTGTGGTATAGCGGCTGTGGCCGCCTTGGCAGGTGTTAGCTATGGGGA
GGCGAAGCGGCGGGCAAATGCTTTGGGGATTTATGCTCAGGACCCCGGTTTGTGGTCAGACACGGGTTATGTCTGCCGGT
TATTAGAGGAATACGGGTTACATGCGTCTCCGCAAGAACAGCCATTTCAGGATTGGGCGGCCCTTCCTGATCGAGCCTTG
TTGGCGATCAAGTGGCACCGGGAAAACGGCACACCCTTTTGGCATTGGGTGGTGTTTGTCCGCGACGGTGGGGACGCCTA
TGTACTGGATTCCAAAAAAGCCCTGAAACAACACTGCCGCCGGGATTTTTGTCGCATAAAACCCAAATGGTTTATCCCCG
TCCGTTCCGGGTAA

Upstream 100 bases:

>100_bases
TGGGAATAGTTGGGCGAGGCGGTTGAGCATGAAGATCGCCTGTTCGTTGGGAAAGCGGCCAGTGTAAGCTGTCAGACGAA
ATGACGCACAGGAGTAATCT

Downstream 100 bases:

>100_bases
CCGTCATAATAACCGGTGTCATCTGGTGGGTTTCCGTTGTACTCAACGCAACGATGGGGTGGGCAATTTTTACTGTAAAA
GGGGTATCGCTGGCGCGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGLHASPQEQPFQDWAALPDRAL
LAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCRRDFCRIKPKWFIPVRSG

Sequences:

>Translated_137_residues
MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGLHASPQEQPFQDWAALPDRAL
LAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCRRDFCRIKPKWFIPVRSG
>Mature_137_residues
MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGLHASPQEQPFQDWAALPDRAL
LAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCRRDFCRIKPKWFIPVRSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15417; Mature: 15417

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGL
CCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCC
HASPQEQPFQDWAALPDRALLAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCR
CCCCCCCCCHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCEEEECCHHHHHHHHH
RDFCRIKPKWFIPVRSG
HHHHCCCCCEEEEECCC
>Mature Secondary Structure
MKAVIQEEDSGCGIAAVAALAGVSYGEAKRRANALGIYAQDPGLWSDTGYVCRLLEEYGL
CCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCC
HASPQEQPFQDWAALPDRALLAIKWHRENGTPFWHWVVFVRDGGDAYVLDSKKALKQHCR
CCCCCCCCCHHHHCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCEEEECCHHHHHHHHH
RDFCRIKPKWFIPVRSG
HHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA