Click here to switch to the map view.

The map label for this gene is yebN [C]

Identifier: 110835339

GI number: 110835339

Start: 2808926

End: 2809486

Strand: Reverse

Name: yebN [C]

Synonym: ABO_2478

Alternate gene names: 110835339

Gene position: 2809486-2808926 (Counterclockwise)

Preceding gene: 110835342

Following gene: 110835336

Centisome position: 90.04

GC content: 47.77

Gene sequence:

>561_bases
ATGAACCCAATAGCCCTTCTTTTGCTTGCCTTTGCCATGTCCACAGATGCTTTCGCTGCTGCGATTGGTAAAGGCGCAAT
CCTTAAAAAACCACGCCTCACTGAAGCTTTCAGAATAGGAATCATCTTTGGTTCTATCGAAGCAATTACGCCGCTTGTAG
GCTGGCTAATTGGAAAATCAGCAGCAAGCTATGTGGAGGCCTGGGATCACTGGATTGCTTTTTCACTCCTGACGGTCCTG
GGTCTTCACATGATTTATGAGGGTACAAGGCCTGATGGGGGTAGTGAGGAGCATAAGGCCCAAAAAATGTCTTTGCTCCG
GACCTGTCTAACGGCATTTAGTACCAGTATTGATGCTATGGCGGTGGGTGTTAGTCTGGCCTTCATCAATGTCAACATAT
GGATAGCTTCAGCTTTGATTGGGCTTGCAACGACCCTCATGGTGACTATTGGCATAATGCTAGGGCGTGCTATAGGGTCG
GTCATGGGACACAGAGCAGAAATTTTTGGCGGACTAACGCTGATTGCAGTGGGCGCATGGATTTTATACGGTCAACTGTA
A

Upstream 100 bases:

>100_bases
GCGAACACCTCTCGGTTGGCGAGACCATCGATATATCCATGCCTAAGGTCGGGCGTGTGGATATATCGTGGACTCGATAT
GCCCGACCGGAGTCAGTTAG

Downstream 100 bases:

>100_bases
GTTTTTTTTCGAGGCTCCACAATGGGCTGGAGCCACGAAATCTCTTTATCCGGCGTTGGTTTCCCTCGTTTCATTAATAC
AACGCTGGGGCTCGACAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNPIALLLLAFAMSTDAFAAAIGKGAILKKPRLTEAFRIGIIFGSIEAITPLVGWLIGKSAASYVEAWDHWIAFSLLTVL
GLHMIYEGTRPDGGSEEHKAQKMSLLRTCLTAFSTSIDAMAVGVSLAFINVNIWIASALIGLATTLMVTIGIMLGRAIGS
VMGHRAEIFGGLTLIAVGAWILYGQL

Sequences:

>Translated_186_residues
MNPIALLLLAFAMSTDAFAAAIGKGAILKKPRLTEAFRIGIIFGSIEAITPLVGWLIGKSAASYVEAWDHWIAFSLLTVL
GLHMIYEGTRPDGGSEEHKAQKMSLLRTCLTAFSTSIDAMAVGVSLAFINVNIWIASALIGLATTLMVTIGIMLGRAIGS
VMGHRAEIFGGLTLIAVGAWILYGQL
>Mature_186_residues
MNPIALLLLAFAMSTDAFAAAIGKGAILKKPRLTEAFRIGIIFGSIEAITPLVGWLIGKSAASYVEAWDHWIAFSLLTVL
GLHMIYEGTRPDGGSEEHKAQKMSLLRTCLTAFSTSIDAMAVGVSLAFINVNIWIASALIGLATTLMVTIGIMLGRAIGS
VMGHRAEIFGGLTLIAVGAWILYGQL

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family

Homologues:

Organism=Escherichia coli, GI87081981, Length=184, Percent_Identity=54.3478260869565, Blast_Score=182, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2478_ALCBS (Q0VLM2)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_694198.1
- STRING:   Q0VLM2
- GeneID:   4213764
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2478
- eggNOG:   COG1971
- HOGENOM:   HBG709685
- OMA:   WDHWVAF
- PhylomeDB:   Q0VLM2
- BioCyc:   ABOR393595:ABO_2478-MONOMER
- HAMAP:   MF_01521
- InterPro:   IPR003810
- InterPro:   IPR022929

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 19720; Mature: 19720

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13a735a0)-; HASH(0x148b1440)-; HASH(0x1498e060)-; HASH(0x14c652b0)-; HASH(0x13ed752c)-; HASH(0x13824e28)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIALLLLAFAMSTDAFAAAIGKGAILKKPRLTEAFRIGIIFGSIEAITPLVGWLIGKS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASYVEAWDHWIAFSLLTVLGLHMIYEGTRPDGGSEEHKAQKMSLLRTCLTAFSTSIDAM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVGVSLAFINVNIWIASALIGLATTLMVTIGIMLGRAIGSVMGHRAEIFGGLTLIAVGAW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILYGQL
HHHCCH
>Mature Secondary Structure
MNPIALLLLAFAMSTDAFAAAIGKGAILKKPRLTEAFRIGIIFGSIEAITPLVGWLIGKS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASYVEAWDHWIAFSLLTVLGLHMIYEGTRPDGGSEEHKAQKMSLLRTCLTAFSTSIDAM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVGVSLAFINVNIWIASALIGLATTLMVTIGIMLGRAIGSVMGHRAEIFGGLTLIAVGAW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILYGQL
HHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA