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The map label for this gene is tnpA [H]

Identifier: 110835336

GI number: 110835336

Start: 2806056

End: 2807345

Strand: Reverse

Name: tnpA [H]

Synonym: ABO_2475

Alternate gene names: 110835336

Gene position: 2807345-2806056 (Counterclockwise)

Preceding gene: 110835339

Following gene: 110835335

Centisome position: 89.97

GC content: 59.07

Gene sequence:

>1290_bases
ATGACCGAAATGCCCGACAACATCCTGCACCTGCCTGAGTACCAGGTGCTGGGCTGCAAATCCACCGACGACGAAATGCA
CTTCCAGGTGGACGCGCCCGATCCCATCGCCTGCGAGGAATGCGGCGTGCAGGGTGAGTTCGTGCGGTTCGGCAAGCGTG
ATGTTCCCTATCGTGATCTGCCCATCCACGGCAAGCGGGTCACCCTCTGGGTGGTCCGCCGCCGGTATACCTGCCGGGCC
TGCAAGACCACATTCAGGCCCCAGCTACCGGAGATGGTGGACGGCTTCCGCATGACGCTGCGGCTGCATGAATACGTGGA
GAAGGAATCCTTCAACCACCCCTACACCTTCGTGGCGGCACAGACCGGCCTGGACGAGAAGACGGTACGCGACATCTTCA
ACGCCCGCGCCGAGTTCCTGGGGCGCTGGCACCGCTTCGAGACGCCCCGAATTCTGGGCATCGACGAGCTGTACCTGAAC
AAGCGTTACCGTTGCATTCTGACCAACATCGAGGAGCGAACCCTGCTTGACCTGCTGGCCACACGCCGTCAGGACGTGGT
GACCAACTACCTGATGAAGCTGAAAGACCTACAGAAGGTCGAGATCGTCAGCATGGACATGTGGAACCCTTACCGGACGG
CGGTCAAGACTGTGCTGTCACAGGCCCGCATCGTGGTCGATAAATTCCATTTGGTGCGTATGGCCAACGATGCCCTGGAG
AAGGTGCGCAAGGGCCTCAGAAAGGAGCTAAAACCTTCCCAAAGCCGAACCCTCAAGGGAGACCGGAAAATCCTGCTGAA
ACGCGCTCACGAAGTCTCAGACCGGGAGCGCCTCATCATGGAGACCTGGACAGGCGCATTCCCGCAACTGCTGGCCGCCT
ACGAGCACAAGGAACGCTTTTACGGCATCTGGGACGCCACTACACGGCCCCAGGCAGAAGCCGCCCTGGACGACTGGATA
GCCACCATCCCGAAGGGCCAGAAGGAAGTCTGGAGTGATTTGGTCAGGGCGGTGGGCAACTGGCACGAAGAGATCATGAC
CTACTTCGAGACGGACATGCCCGTCACCAACGCTTACACGGAGTCCATCAACCGACTGGCCAAGGACAAGAACCGTGAAG
GGCGTGGTTACTCGTTCGAGGTGATGCGGGCACGAATGCTCTACACCACGAAGCACAAGAAGAAGGCTCCGACTGCGAAG
GTCTCTCCGTTCTACAAGAAAACCATCGGTTACGGACTGCCGGACTTTGCAGAGGAACTCAACTACGGGGTCGATCTATC
AACCATCTGA

Upstream 100 bases:

>100_bases
TAGTATATAAATACTAGGGGGTAGTATGCTTGTTTGCAAGAGAGGAGAGGTAGGTGAAGCTCACCAACGTGACACTCGCC
AGCCGTAAGGAGCACGCCGC

Downstream 100 bases:

>100_bases
GGGTGGTATCAGGTTGGTGGGGTGAAGGTGCCCCATCAACCATTAAATCCGTATACCCCCTTTTTCATTCCGGCGAAACG
GAGCCGACACTATACGATGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRA
CKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLN
KRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDLQKVEIVSMDMWNPYRTAVKTVLSQARIVVDKFHLVRMANDALE
KVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRPQAEAALDDWI
ATIPKGQKEVWSDLVRAVGNWHEEIMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAK
VSPFYKKTIGYGLPDFAEELNYGVDLSTI

Sequences:

>Translated_429_residues
MTEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRA
CKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLN
KRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDLQKVEIVSMDMWNPYRTAVKTVLSQARIVVDKFHLVRMANDALE
KVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRPQAEAALDDWI
ATIPKGQKEVWSDLVRAVGNWHEEIMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAK
VSPFYKKTIGYGLPDFAEELNYGVDLSTI
>Mature_428_residues
TEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRAC
KTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNK
RYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDLQKVEIVSMDMWNPYRTAVKTVLSQARIVVDKFHLVRMANDALEK
VRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRPQAEAALDDWIA
TIPKGQKEVWSDLVRAVGNWHEEIMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAKV
SPFYKKTIGYGLPDFAEELNYGVDLSTI

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 50289; Mature: 50157

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDL
CCCCCCCCEECCCCEEEECCCCCCCEEEEECCCCCCCHHHCCCCCHHHHCCCCCCCCCCC
PIHGKRVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAA
CCCCCEEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
QTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHCCCEEEEEECCHHHHHHHHHH
TRRQDVVTNYLMKLKDLQKVEIVSMDMWNPYRTAVKTVLSQARIVVDKFHLVRMANDALE
HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERF
HHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHE
YGIWDATTRPQAEAALDDWIATIPKGQKEVWSDLVRAVGNWHEEIMTYFETDMPVTNAYT
EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAKVSPFYKKTIGYGLPDFAEEL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHC
NYGVDLSTI
CCCCCCCCC
>Mature Secondary Structure 
TEMPDNILHLPEYQVLGCKSTDDEMHFQVDAPDPIACEECGVQGEFVRFGKRDVPYRDL
CCCCCCCEECCCCEEEECCCCCCCEEEEECCCCCCCHHHCCCCCHHHHCCCCCCCCCCC
PIHGKRVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAA
CCCCCEEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
QTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHCCCEEEEEECCHHHHHHHHHH
TRRQDVVTNYLMKLKDLQKVEIVSMDMWNPYRTAVKTVLSQARIVVDKFHLVRMANDALE
HHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERF
HHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHE
YGIWDATTRPQAEAALDDWIATIPKGQKEVWSDLVRAVGNWHEEIMTYFETDMPVTNAYT
EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAKVSPFYKKTIGYGLPDFAEEL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHC
NYGVDLSTI
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]