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The map label for this gene is cioA [H]

Identifier: 110835283

GI number: 110835283

Start: 2740642

End: 2742030

Strand: Reverse

Name: cioA [H]

Synonym: ABO_2422

Alternate gene names: 110835283

Gene position: 2742030-2740642 (Counterclockwise)

Preceding gene: 110835286

Following gene: 110835282

Centisome position: 87.88

GC content: 54.57

Gene sequence:

>1389_bases
GTGGAATTTGATCCGTTCCTGTTGGCCCGGCTTCAGTTTGCCGCCAACATCAGCTTTCATATCTTGTTTCCTACTATCAC
CATAGGCCTGTGTTGGGTGCTCTTTTATTTCCGGTTGCGCTACACCTTCTCCGGAGATAAGGCTTGGGAATATGCCTATT
TTTTCTGGGTGAAGATTTTTGCACTCAGTTTTGCATTGGGTGTGGTGTCCGGCATCACCATGAGTTTCCAGTTCGGCACT
AACTGGCCAGGCTTTATGGAAAAGGCGGGGAACATTGCCGGGCCATTGCTAGGGTACGAAGTGCTGACCGCGTTTTTTCT
TGAGGCCTCGTTTCTTGGCATCATGCTGTTCGGTAAAAACCGTGTCTCCAATCGCCTCCACCTGACGTCCTGTGCGTTAG
TGGCTGTGGGCACCAGTTTTTCCGCATTTTGGATTCTCAGCCTTAATTCTTGGATGCAGACGCCAACAGGGTTTCGCTTG
GAGGATGGCGTTTTTTACGTGGATAGCTGGTGGACGGCGATCTTTAATCCTTCGTTTCCCTATCGCCTGGCGCATATGTT
TAATGCCTCTCTCCTTACCGCCGCGTTCCTGATTATGGGGGTTAGTGCCTGGCGGGCCATGCGCAGGGTCGATGGCCCAG
CTACCTGGAAAGTGATGCGCACCGGCGCGGTGATGGCTGCGGTACTGGCTCCCTTGCAAGTCTGGATAGGCGATCTTCAC
GGCTTGAATACCCTAGAACACCAACCGGCCAAGATTGCCGCCATGGAAGGGGTATGGGAGACCGAGAGCAATGTCCCGCT
GACCCTATTTGGATTCCCTGATGAGGAGCAGCGTACTACTCATATGGCCATTAAAGTGCCCGGCTTGGGCAGCCTTATCC
TGACCCATGACTGGAATGGTGAACTGAAAGGGTTGAACGATTTTGAGGGCGACCATCCGCCGGTGGCGCCCGTGTTCTGG
TCTTTTCGGGTCATGGTGGGCGTAGGGGTATTGATGGTGTTGGTCGGTTGGTGGGCCGCTTGGCGATTGTTCCGGCGACG
TGATGAAAACCGGGATGCTCAAGTATGGTTATTGCGGGCCCTATCGGTGATGACATTTTCGGGCTGGGTGGCGGTCTTGG
CTGGCTGGTATGTCACCGAGATTGGCCGCCAGCCGTGGATGGTCAGTGGCCTGATGCGAACCTCCGAGGTGGTAGCAGAT
CACAGTAGCGCCACGGTCATGGGCACGTTGTTTGGTTACGTATTGCTGTACGTCTTTCTATTGGTGTCTTACATCGCGGC
ATTGCGCTACATGGCCACCAAGCCGGCGCGCTCCTTGTCTCTGACCCCACAGCAGCGGGCTATGAAAGCTGAACGAGCCG
ACGATGAACAAGCAGAAGGAGAAGCGTGA

Upstream 100 bases:

>100_bases
GTTAAACATGGACCATTTGTCTCATTTAGCTTGCAAGTTTCTATGATATTGTCTCTAGGAGTGAACCCCTGCCATTCAAT
TAAGCGAAGGAGTTGCTTCG

Downstream 100 bases:

>100_bases
TGGATATTGGATATTGGCTTCCGTTGTTCTTTGCCGGCGCCATGGGGTTGGCGCTGCTGATTTATGTGGTGCTCGATGGC
TATGACTTGGGCATCGGTTT

Product: cytochrome bd-1 oxidase subunit I

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MEFDPFLLARLQFAANISFHILFPTITIGLCWVLFYFRLRYTFSGDKAWEYAYFFWVKIFALSFALGVVSGITMSFQFGT
NWPGFMEKAGNIAGPLLGYEVLTAFFLEASFLGIMLFGKNRVSNRLHLTSCALVAVGTSFSAFWILSLNSWMQTPTGFRL
EDGVFYVDSWWTAIFNPSFPYRLAHMFNASLLTAAFLIMGVSAWRAMRRVDGPATWKVMRTGAVMAAVLAPLQVWIGDLH
GLNTLEHQPAKIAAMEGVWETESNVPLTLFGFPDEEQRTTHMAIKVPGLGSLILTHDWNGELKGLNDFEGDHPPVAPVFW
SFRVMVGVGVLMVLVGWWAAWRLFRRRDENRDAQVWLLRALSVMTFSGWVAVLAGWYVTEIGRQPWMVSGLMRTSEVVAD
HSSATVMGTLFGYVLLYVFLLVSYIAALRYMATKPARSLSLTPQQRAMKAERADDEQAEGEA

Sequences:

>Translated_462_residues
MEFDPFLLARLQFAANISFHILFPTITIGLCWVLFYFRLRYTFSGDKAWEYAYFFWVKIFALSFALGVVSGITMSFQFGT
NWPGFMEKAGNIAGPLLGYEVLTAFFLEASFLGIMLFGKNRVSNRLHLTSCALVAVGTSFSAFWILSLNSWMQTPTGFRL
EDGVFYVDSWWTAIFNPSFPYRLAHMFNASLLTAAFLIMGVSAWRAMRRVDGPATWKVMRTGAVMAAVLAPLQVWIGDLH
GLNTLEHQPAKIAAMEGVWETESNVPLTLFGFPDEEQRTTHMAIKVPGLGSLILTHDWNGELKGLNDFEGDHPPVAPVFW
SFRVMVGVGVLMVLVGWWAAWRLFRRRDENRDAQVWLLRALSVMTFSGWVAVLAGWYVTEIGRQPWMVSGLMRTSEVVAD
HSSATVMGTLFGYVLLYVFLLVSYIAALRYMATKPARSLSLTPQQRAMKAERADDEQAEGEA
>Mature_462_residues
MEFDPFLLARLQFAANISFHILFPTITIGLCWVLFYFRLRYTFSGDKAWEYAYFFWVKIFALSFALGVVSGITMSFQFGT
NWPGFMEKAGNIAGPLLGYEVLTAFFLEASFLGIMLFGKNRVSNRLHLTSCALVAVGTSFSAFWILSLNSWMQTPTGFRL
EDGVFYVDSWWTAIFNPSFPYRLAHMFNASLLTAAFLIMGVSAWRAMRRVDGPATWKVMRTGAVMAAVLAPLQVWIGDLH
GLNTLEHQPAKIAAMEGVWETESNVPLTLFGFPDEEQRTTHMAIKVPGLGSLILTHDWNGELKGLNDFEGDHPPVAPVFW
SFRVMVGVGVLMVLVGWWAAWRLFRRRDENRDAQVWLLRALSVMTFSGWVAVLAGWYVTEIGRQPWMVSGLMRTSEVVAD
HSSATVMGTLFGYVLLYVFLLVSYIAALRYMATKPARSLSLTPQQRAMKAERADDEQAEGEA

Specific function: Cytochrome Oxidase Subunit. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=527, Percent_Identity=32.0683111954459, Blast_Score=221, Evalue=9e-59,
Organism=Escherichia coli, GI87081779, Length=494, Percent_Identity=32.1862348178138, Blast_Score=218, Evalue=9e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 52033; Mature: 52033

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDPFLLARLQFAANISFHILFPTITIGLCWVLFYFRLRYTFSGDKAWEYAYFFWVKIF
CCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
ALSFALGVVSGITMSFQFGTNWPGFMEKAGNIAGPLLGYEVLTAFFLEASFLGIMLFGKN
HHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCC
RVSNRLHLTSCALVAVGTSFSAFWILSLNSWMQTPTGFRLEDGVFYVDSWWTAIFNPSFP
CCCCEEEHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCEEECCEEEEECHHHHHCCCCCC
YRLAHMFNASLLTAAFLIMGVSAWRAMRRVDGPATWKVMRTGAVMAAVLAPLQVWIGDLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GLNTLEHQPAKIAAMEGVWETESNVPLTLFGFPDEEQRTTHMAIKVPGLGSLILTHDWNG
CCCCCCCCCCHHEECCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCC
ELKGLNDFEGDHPPVAPVFWSFRVMVGVGVLMVLVGWWAAWRLFRRRDENRDAQVWLLRA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LSVMTFSGWVAVLAGWYVTEIGRQPWMVSGLMRTSEVVADHSSATVMGTLFGYVLLYVFL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVSYIAALRYMATKPARSLSLTPQQRAMKAERADDEQAEGEA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEFDPFLLARLQFAANISFHILFPTITIGLCWVLFYFRLRYTFSGDKAWEYAYFFWVKIF
CCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
ALSFALGVVSGITMSFQFGTNWPGFMEKAGNIAGPLLGYEVLTAFFLEASFLGIMLFGKN
HHHHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCC
RVSNRLHLTSCALVAVGTSFSAFWILSLNSWMQTPTGFRLEDGVFYVDSWWTAIFNPSFP
CCCCEEEHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCEEECCEEEEECHHHHHCCCCCC
YRLAHMFNASLLTAAFLIMGVSAWRAMRRVDGPATWKVMRTGAVMAAVLAPLQVWIGDLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GLNTLEHQPAKIAAMEGVWETESNVPLTLFGFPDEEQRTTHMAIKVPGLGSLILTHDWNG
CCCCCCCCCCHHEECCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCC
ELKGLNDFEGDHPPVAPVFWSFRVMVGVGVLMVLVGWWAAWRLFRRRDENRDAQVWLLRA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LSVMTFSGWVAVLAGWYVTEIGRQPWMVSGLMRTSEVVADHSSATVMGTLFGYVLLYVFL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVSYIAALRYMATKPARSLSLTPQQRAMKAERADDEQAEGEA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]