Click here to switch to the map view.

The map label for this gene is cioB [H]

Identifier: 110835282

GI number: 110835282

Start: 2739644

End: 2740645

Strand: Reverse

Name: cioB [H]

Synonym: ABO_2421

Alternate gene names: 110835282

Gene position: 2740645-2739644 (Counterclockwise)

Preceding gene: 110835283

Following gene: 110835278

Centisome position: 87.84

GC content: 51.4

Gene sequence:

>1002_bases
GTGATGGATATTGGATATTGGCTTCCGTTGTTCTTTGCCGGCGCCATGGGGTTGGCGCTGCTGATTTATGTGGTGCTCGA
TGGCTATGACTTGGGCATCGGTTTGCTATTGCCGTTTGCCGATGAAGAAGAGAAAGATGTCATGGTGGCCGCCATTGGCC
CGTTTTGGGATGCCAACGAAACCTGGATTGTATTGGGGGTTGGTATTTTACTAATTGCTTTTCCTCAGGCCCACGGGTTA
GTGCTCACTTCTCTCTACTTGCCTGTAACGCTGATGTTGATGGGGCTGATACTTCGCGGTGTGTCGTTCGACTTCCGCGT
TAAGGCTGGCGACAAACATAAGGGCAAATGGAACTCGCTATTTGCAGTGGGTTCGCTGGTCGCGTCAGTATCGCAGGGCT
GGATGCTGGGTGCTTTTGTGACGGGGCTTACCGGGGATGCCACCAATATTATGTTCGCTATCCTGATCGCACTGGCGTTA
CCGGCACTTTACATCATGCTGGGTGCCTCCTGGTTGCTAATCAAGACGGAAGGCGCGTTGTTTAACAAGGCAGTGCGTTG
GGGGCGGCGGGCAGTCTTGCCTATGGGCGGCTTTTTACTGCTTATTTCCGTTGCTACGCCCTTGGTCAGTGAAGCCATTG
CAGACAAATGGTTCACTCTGCCAAACGCTATCGGCTTGATGCCCATTCCGATTGCTACCGCACTGGCTTATGCGGGGCTG
ATCTGGGTATTTAACAGCCGTAAGATTTTGGATAATGGTTATGGCTGGCTGGCGTTCTTGTCTCTGATTGTGATGTGTGT
GCTGGCGAGTCTTGGCCTGGCCTACAGTTTATTTCCGGATATTGTGCTGGGTCGGTTGTCGATTTGGGAATCAGCTTCAG
CCACGGAGTCGTTGTTGTTCACGTTTTGGGGAACGGTGATTACATTGCCGATGATTCTTGGCTATACGTTCTTCATTTAT
CGGGTGTTTCGTGGGAAGGCAACAGACCTTAGTTACGAGTAA

Upstream 100 bases:

>100_bases
GCTACATGGCCACCAAGCCGGCGCGCTCCTTGTCTCTGACCCCACAGCAGCGGGCTATGAAAGCTGAACGAGCCGACGAT
GAACAAGCAGAAGGAGAAGC

Downstream 100 bases:

>100_bases
ATAAGGCAGGGGAGGCAGTGCCTCCTGCCTCCTGCGATTAAAAGGGCGCCTGCCGGCCACAACGGCTGCCAATTGACAGG
TTGATAAAATGAGCCTCACG

Product: cytochrome bd-I oxidase subunit II

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit II [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MMDIGYWLPLFFAGAMGLALLIYVVLDGYDLGIGLLLPFADEEEKDVMVAAIGPFWDANETWIVLGVGILLIAFPQAHGL
VLTSLYLPVTLMLMGLILRGVSFDFRVKAGDKHKGKWNSLFAVGSLVASVSQGWMLGAFVTGLTGDATNIMFAILIALAL
PALYIMLGASWLLIKTEGALFNKAVRWGRRAVLPMGGFLLLISVATPLVSEAIADKWFTLPNAIGLMPIPIATALAYAGL
IWVFNSRKILDNGYGWLAFLSLIVMCVLASLGLAYSLFPDIVLGRLSIWESASATESLLFTFWGTVITLPMILGYTFFIY
RVFRGKATDLSYE

Sequences:

>Translated_333_residues
MMDIGYWLPLFFAGAMGLALLIYVVLDGYDLGIGLLLPFADEEEKDVMVAAIGPFWDANETWIVLGVGILLIAFPQAHGL
VLTSLYLPVTLMLMGLILRGVSFDFRVKAGDKHKGKWNSLFAVGSLVASVSQGWMLGAFVTGLTGDATNIMFAILIALAL
PALYIMLGASWLLIKTEGALFNKAVRWGRRAVLPMGGFLLLISVATPLVSEAIADKWFTLPNAIGLMPIPIATALAYAGL
IWVFNSRKILDNGYGWLAFLSLIVMCVLASLGLAYSLFPDIVLGRLSIWESASATESLLFTFWGTVITLPMILGYTFFIY
RVFRGKATDLSYE
>Mature_333_residues
MMDIGYWLPLFFAGAMGLALLIYVVLDGYDLGIGLLLPFADEEEKDVMVAAIGPFWDANETWIVLGVGILLIAFPQAHGL
VLTSLYLPVTLMLMGLILRGVSFDFRVKAGDKHKGKWNSLFAVGSLVASVSQGWMLGAFVTGLTGDATNIMFAILIALAL
PALYIMLGASWLLIKTEGALFNKAVRWGRRAVLPMGGFLLLISVATPLVSEAIADKWFTLPNAIGLMPIPIATALAYAGL
IWVFNSRKILDNGYGWLAFLSLIVMCVLASLGLAYSLFPDIVLGRLSIWESASATESLLFTFWGTVITLPMILGYTFFIY
RVFRGKATDLSYE

Specific function: Cytochrome Oxidase Subunit. [C]

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787213, Length=355, Percent_Identity=24.5070422535211, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1786954, Length=372, Percent_Identity=23.9247311827957, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 36283; Mature: 36283

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDIGYWLPLFFAGAMGLALLIYVVLDGYDLGIGLLLPFADEEEKDVMVAAIGPFWDANE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCC
TWIVLGVGILLIAFPQAHGLVLTSLYLPVTLMLMGLILRGVSFDFRVKAGDKHKGKWNSL
CEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
FAVGSLVASVSQGWMLGAFVTGLTGDATNIMFAILIALALPALYIMLGASWLLIKTEGAL
HHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH
FNKAVRWGRRAVLPMGGFLLLISVATPLVSEAIADKWFTLPNAIGLMPIPIATALAYAGL
HHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IWVFNSRKILDNGYGWLAFLSLIVMCVLASLGLAYSLFPDIVLGRLSIWESASATESLLF
HHEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TFWGTVITLPMILGYTFFIYRVFRGKATDLSYE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMDIGYWLPLFFAGAMGLALLIYVVLDGYDLGIGLLLPFADEEEKDVMVAAIGPFWDANE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCC
TWIVLGVGILLIAFPQAHGLVLTSLYLPVTLMLMGLILRGVSFDFRVKAGDKHKGKWNSL
CEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
FAVGSLVASVSQGWMLGAFVTGLTGDATNIMFAILIALALPALYIMLGASWLLIKTEGAL
HHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH
FNKAVRWGRRAVLPMGGFLLLISVATPLVSEAIADKWFTLPNAIGLMPIPIATALAYAGL
HHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
IWVFNSRKILDNGYGWLAFLSLIVMCVLASLGLAYSLFPDIVLGRLSIWESASATESLLF
HHEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TFWGTVITLPMILGYTFFIYRVFRGKATDLSYE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]