| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835249
Identifier: 110835249
GI number: 110835249
Start: 2711825
End: 2712163
Strand: Direct
Name: 110835249
Synonym: ABO_2388
Alternate gene names: NA
Gene position: 2711825-2712163 (Clockwise)
Preceding gene: 110835248
Following gene: 110835250
Centisome position: 86.91
GC content: 56.34
Gene sequence:
>339_bases ATGAGTAACACCAGCACCGCCAACCTGGCTCGCATCATCTATGTGCTACATTTGCTGGGTCTGATCACCGGCGGGCTTAC CGCCATTGTCGGCGTGATTCTTGCTCACATTAATGTCAGCGATGCTCCACCACCGCTACGCGAGCATTTTCGGTTTCAGT ACCGCACCTTCTGGATTGGCCTGCTGTACTGGTTTATTGCCGGCATCACCACCCTGGCCCTGATTGGCTGGCTGTTGATG GTGCTAATCTCCGTCTGGTGGATTGTACGGTGCGCCCGGGGCATGTCTGCCCTGAATCGCAACCAGCCACCTAGCAAGGT GGAGAGCTGGGGGTTCTAA
Upstream 100 bases:
>100_bases TCCCCTTATTGCCGTAGCGACCCTACTGAGCGGCGGCCAACGTAATCGGGGGCTAGGCGCAGCATCCGCCGAAGGCTCCC GCCAGCAAAGAGGCCCAACA
Downstream 100 bases:
>100_bases TACCCCTATCGATTTGTCACATAACTGACACAGGCGCAGGCCAGACTGGCCGGCCGCGTCATCAACCGCCCTAAGGAGAA GTCATGTTGCCCCTGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSNTSTANLARIIYVLHLLGLITGGLTAIVGVILAHINVSDAPPPLREHFRFQYRTFWIGLLYWFIAGITTLALIGWLLM VLISVWWIVRCARGMSALNRNQPPSKVESWGF
Sequences:
>Translated_112_residues MSNTSTANLARIIYVLHLLGLITGGLTAIVGVILAHINVSDAPPPLREHFRFQYRTFWIGLLYWFIAGITTLALIGWLLM VLISVWWIVRCARGMSALNRNQPPSKVESWGF >Mature_111_residues SNTSTANLARIIYVLHLLGLITGGLTAIVGVILAHINVSDAPPPLREHFRFQYRTFWIGLLYWFIAGITTLALIGWLLMV LISVWWIVRCARGMSALNRNQPPSKVESWGF
Specific function: Unknown
COG id: COG3671
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12608; Mature: 12477
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTSTANLARIIYVLHLLGLITGGLTAIVGVILAHINVSDAPPPLREHFRFQYRTFWIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LLYWFIAGITTLALIGWLLMVLISVWWIVRCARGMSALNRNQPPSKVESWGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCC >Mature Secondary Structure SNTSTANLARIIYVLHLLGLITGGLTAIVGVILAHINVSDAPPPLREHFRFQYRTFWIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH LLYWFIAGITTLALIGWLLMVLISVWWIVRCARGMSALNRNQPPSKVESWGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA