Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835250

Identifier: 110835250

GI number: 110835250

Start: 2712247

End: 2712933

Strand: Direct

Name: 110835250

Synonym: ABO_2389

Alternate gene names: NA

Gene position: 2712247-2712933 (Clockwise)

Preceding gene: 110835249

Following gene: 110835253

Centisome position: 86.93

GC content: 55.75

Gene sequence:

>687_bases
ATGTTGCCCCTGCGCCTGCTTACCGTAACCCTTTGCGCCCTGTTTCTGGCCGCCTGCGCCCGCAGCCCCGTGGTACAGCT
ATACGATGGCCCAGCCAAAGCCGACAGCCAAGTGCTCACCGTTAAGGTGCCCAGCGAAATCGAAGTGTTCACCATTAACG
GCAAAGAACTGGAAGGCGTAAACACCTTTTTCGCCACCGACTTTAAGGAACTGAAGTTAGCGCCCGGCCGCTATGAAATC
CTCGCCTATTACAAAGAGTTATGGCAACTGGATGTGGACAATCATGAGATTGTGAAAACCAACCCAGCCAACTTCATCAT
CGATGGCAAGGCAGGCGACCAATGGCAGCTGGGCTTCGACAAACCCCAGAATGTGGAAGAGGCCCGCGCCATGGAAGACA
GCTTTAGCGGCTGGGCCAGCAATACCGAAACCGGGGAAAAAGTGGCGGCCAAAGAATCTGATCTGATCCTTAACCGCGGT
TTCCTGGCGCCAATCACCGGCGAAGAAGTCACCACCGCTACCAGCAACAGCATTGCCCCCCAAAATGCAGCAGGGGCCAA
TGCCGCCAATGCACAAAAGAGCACCAGCGTCGCGCCCGGGGCCAGCTACTTGGATACGCTTAAAGCGCAATGGAAACAGG
CCACCCAGCAAGAGCGTCGCGAATTCCTGCAGTGGATCTCAGAATAA

Upstream 100 bases:

>100_bases
AGAGCTGGGGGTTCTAATACCCCTATCGATTTGTCACATAACTGACACAGGCGCAGGCCAGACTGGCCGGCCGCGTCATC
AACCGCCCTAAGGAGAAGTC

Downstream 100 bases:

>100_bases
CCCAACACCGCATGCGTTCACGCGGGCAGGCAAGCGGCACCGCCCGCGCCTTGCCCGCGCCTTACCCACACAAGGCTCCT
TCAGGCTCGGCGAGTCACTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLPLRLLTVTLCALFLAACARSPVVQLYDGPAKADSQVLTVKVPSEIEVFTINGKELEGVNTFFATDFKELKLAPGRYEI
LAYYKELWQLDVDNHEIVKTNPANFIIDGKAGDQWQLGFDKPQNVEEARAMEDSFSGWASNTETGEKVAAKESDLILNRG
FLAPITGEEVTTATSNSIAPQNAAGANAANAQKSTSVAPGASYLDTLKAQWKQATQQERREFLQWISE

Sequences:

>Translated_228_residues
MLPLRLLTVTLCALFLAACARSPVVQLYDGPAKADSQVLTVKVPSEIEVFTINGKELEGVNTFFATDFKELKLAPGRYEI
LAYYKELWQLDVDNHEIVKTNPANFIIDGKAGDQWQLGFDKPQNVEEARAMEDSFSGWASNTETGEKVAAKESDLILNRG
FLAPITGEEVTTATSNSIAPQNAAGANAANAQKSTSVAPGASYLDTLKAQWKQATQQERREFLQWISE
>Mature_228_residues
MLPLRLLTVTLCALFLAACARSPVVQLYDGPAKADSQVLTVKVPSEIEVFTINGKELEGVNTFFATDFKELKLAPGRYEI
LAYYKELWQLDVDNHEIVKTNPANFIIDGKAGDQWQLGFDKPQNVEEARAMEDSFSGWASNTETGEKVAAKESDLILNRG
FLAPITGEEVTTATSNSIAPQNAAGANAANAQKSTSVAPGASYLDTLKAQWKQATQQERREFLQWISE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25017; Mature: 25017

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLRLLTVTLCALFLAACARSPVVQLYDGPAKADSQVLTVKVPSEIEVFTINGKELEGV
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCC
NTFFATDFKELKLAPGRYEILAYYKELWQLDVDNHEIVKTNPANFIIDGKAGDQWQLGFD
HHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCEEEECCC
KPQNVEEARAMEDSFSGWASNTETGEKVAAKESDLILNRGFLAPITGEEVTTATSNSIAP
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEECCEECCCCCCCEEECCCCCCCC
QNAAGANAANAQKSTSVAPGASYLDTLKAQWKQATQQERREFLQWISE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPLRLLTVTLCALFLAACARSPVVQLYDGPAKADSQVLTVKVPSEIEVFTINGKELEGV
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCCC
NTFFATDFKELKLAPGRYEILAYYKELWQLDVDNHEIVKTNPANFIIDGKAGDQWQLGFD
HHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCEEEECCC
KPQNVEEARAMEDSFSGWASNTETGEKVAAKESDLILNRGFLAPITGEEVTTATSNSIAP
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEECCEECCCCCCCEEECCCCCCCC
QNAAGANAANAQKSTSVAPGASYLDTLKAQWKQATQQERREFLQWISE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA