| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835152
Identifier: 110835152
GI number: 110835152
Start: 2612723
End: 2613889
Strand: Direct
Name: 110835152
Synonym: ABO_2291
Alternate gene names: NA
Gene position: 2612723-2613889 (Clockwise)
Preceding gene: 110835150
Following gene: 110835153
Centisome position: 83.74
GC content: 56.64
Gene sequence:
>1167_bases ATGCCACCACTGCCCCCCAACATCATGCAAGGTCGCTGGCTACGCTGGTGGCTCACATTATCATTTGCAGTGATGTTCAG CGGTGTCTTCCTGTTCAGCTCCCGCATCGGCTTACTTAACGTGCTAGATGTGCTTTTCTTTTTGCCCGGCCTAACCCTGC TCACCCGCGCCGTAGTCAGTGGCGATCATCGCCTGATGACCTCGCCTTTTCTTGTTCCTCTTTATCTATTGCTCGCCTGG GCCTTGCTCAGCCTAGCTTGGGCAGAAGAACCCAATTCCTCACGCACGGTGCGCGGAGTCGTGCAGATTGTGGTGATGGT GGGGTTATTTCGTTGGCTACACCTGCATTTCCGTAACACCTTTAAACAAGCCATGGCCAACGGCGCCCTGTGTGCCGTGA TTGTGTCTTCAATCGTTATGGTCAGCTACTACACCACTCAGCCATTCAGCAGCCCCCTGTTCAGCGAACCGGCAAACCTG ATTTTTCGCATGCCTTCTCTTGACCCCTCCCTGGCACTGATGGCCATGGTGGCACCGACGTTCATTCTTCTGGCACAGGG CATGGAAGAAGGGGCATCCGGCAAAGGCGCCCGCCGCTTGGTTGGTGCCGGGGTCGGCTTTGTGTTTCTTTGCCTAGCCT CTTTGCCTCTGGGGTTAATGTGCATCATGCTTGCTGTCGCTTGGCTGCTTACCCGTAGCTCTCGCCGCTGGCTAAGCCTG ATCCCGCTGGCCGCTGCCTTTTACCTGATGGTGCAAGGTGGCCACAGTGTGGCGGTGAACAACTACTTCGCTCACCCCCT AATCGGTAACGGGCTGAATCACGAAACATTGAATGGAGTGCTCGCCTACAACGGCTCTCACCTACAGACCCTCGCTCACC CCCGAAATATTTTTCTGCTATTGATTCACGGGCTGGGATTGGTCGGCCTGGTGCTGTTCATCGCCAGTTGGGTAAGCCCA CTGACCGCCCTACTGCAGCGCCAGATCAACTGGCATGACAGTGCGGCCTACACCATTGCTGTTCTGCCAGGCCTGTGTAT GGCCTACGCCGCCGGCGCATATCTACTCGTGCCATTCCATGCCAGCTGGCTTAGCCTTTGGCTCCCTTTAGCGCTTCTGC TGGCCCGACTCAGCGAGCGCCCAAGCATCCATCCCAACAGTCGTTGA
Upstream 100 bases:
>100_bases GCGTGAGTGTGTCACCCGGCAATTACGCATCACCTCGCTGTCAGGGTATCATTCAGTAGCCCTTAACCCTTGGCCAATTT TAGAAGCAACAGGACACGCT
Downstream 100 bases:
>100_bases GATTACCATGGGAAAACGCATCAACCGACCTTCACGCCTCTCCGATCCGCGCCTATACCCTAGCTGGCTAGGCGTCGGGC TATTCTGGCTAGTCGGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MPPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVSGDHRLMTSPFLVPLYLLLAW ALLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNTFKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANL IFRMPSLDPSLALMAMVAPTFILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSL IPLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLLLIHGLGLVGLVLFIASWVSP LTALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFHASWLSLWLPLALLLARLSERPSIHPNSR
Sequences:
>Translated_388_residues MPPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVSGDHRLMTSPFLVPLYLLLAW ALLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNTFKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANL IFRMPSLDPSLALMAMVAPTFILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSL IPLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLLLIHGLGLVGLVLFIASWVSP LTALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFHASWLSLWLPLALLLARLSERPSIHPNSR >Mature_387_residues PPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVSGDHRLMTSPFLVPLYLLLAWA LLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNTFKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANLI FRMPSLDPSLALMAMVAPTFILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSLI PLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLLLIHGLGLVGLVLFIASWVSPL TALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFHASWLSLWLPLALLLARLSERPSIHPNSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42621; Mature: 42490
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GDHRLMTSPFLVPLYLLLAWALLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNT CCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANLIFRMPSLDPSLALMAMVAPT HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHH FILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IPLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLL HHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCHHHHCCEEEECCCHHHHHHCCHHHHHH LIHGLGLVGLVLFIASWVSPLTALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHH ASWLSLWLPLALLLARLSERPSIHPNSR HHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GDHRLMTSPFLVPLYLLLAWALLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNT CCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANLIFRMPSLDPSLALMAMVAPT HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHH FILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSL HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH IPLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLL HHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCHHHHCCEEEECCCHHHHHHCCHHHHHH LIHGLGLVGLVLFIASWVSPLTALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHH ASWLSLWLPLALLLARLSERPSIHPNSR HHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA