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The map label for this gene is yfgC [C]

Identifier: 110835150

GI number: 110835150

Start: 2610012

End: 2610800

Strand: Direct

Name: yfgC [C]

Synonym: ABO_2289

Alternate gene names: 110835150

Gene position: 2610012-2610800 (Clockwise)

Preceding gene: 110835149

Following gene: 110835152

Centisome position: 83.65

GC content: 58.05

Gene sequence:

>789_bases
GTGCGTTTTTTCCTCTTGGCCATTTTGCCTTTACTGCTGGTCGGCTGCGACCAGACTCCCACCGGTCGCGACCAACTGGC
GCTAGTACCAGAGTCTATGATGGCGGACTTTGGTCGTCAGACTTTTGTGCAGATGCAGCAGCAGTTGCCGGTGGGTACCG
GCGAAAGCGCCCGCCGAAAGGTGCAATGTGTGGCAGAGCACCTGATCAGCCGCATCCCCGCACGCTTTCCTGGTGCGACC
ATGCCGACCACCTGGGAGGTGGTGCTGTTCGCAGATTCCACACCTAATGCCTTTGCTCTACCCGGAGGCAAGATAGGCGT
CAATGAAGGGCTGCTTAAGGTGGCACAAAGCGACGACCAGCTGGCCGCAGTGGTGGGCCATGAAATCGCCCATGTACTGG
CCAAGCACGGCAACGAGCGGTTAACCCAGGAGTTGGGCATCAAAACAGTATTGTTCATCGTTGGGCTGTTCAGTGAAGGT
GATGCAGATACCGAGAATATTCGGCAGGCCCTCGGCGTGGGAGCATATCTGGGGATTGCGCTACCGTTCAGCCGTAGCCA
TGAGCAGGAAGCGGACGCCATGGGCCTAGAGTTGATGGCCAGCGCGGGTTTTGATCCACTACAAAGCATTCAACTATGGC
GCAATATGGCCGCCGCAGGCGGTGCCCAACCTATGGAGTTTCTCTCCACCCACCCTAATCACGACAGCCGCATCAAGGCA
CTGGAGGAGCGGATGGGGAACACCCTGCCGCTGTATCATCAAGCGTCGCCGGTGAACTGCGAACGCTAA

Upstream 100 bases:

>100_bases
GGGGCCTTTTCGTTTCGGGCGTCCCTACACAACACCCGCAACCTGCGCTACCGTGAAGCATAACTTCGCGGCCTGAGCGC
CGCTCCAACAAGGTTTCCCT

Downstream 100 bases:

>100_bases
TCGCATCACAGCCGGCGTTGCTGCGAACAACAACCATTAGCTAGCCACCACGACTTTCAGGGAGACCGCCTTAACCTCCG
GCAGCCAATCATCGTCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRFFLLAILPLLLVGCDQTPTGRDQLALVPESMMADFGRQTFVQMQQQLPVGTGESARRKVQCVAEHLISRIPARFPGAT
MPTTWEVVLFADSTPNAFALPGGKIGVNEGLLKVAQSDDQLAAVVGHEIAHVLAKHGNERLTQELGIKTVLFIVGLFSEG
DADTENIRQALGVGAYLGIALPFSRSHEQEADAMGLELMASAGFDPLQSIQLWRNMAAAGGAQPMEFLSTHPNHDSRIKA
LEERMGNTLPLYHQASPVNCER

Sequences:

>Translated_262_residues
MRFFLLAILPLLLVGCDQTPTGRDQLALVPESMMADFGRQTFVQMQQQLPVGTGESARRKVQCVAEHLISRIPARFPGAT
MPTTWEVVLFADSTPNAFALPGGKIGVNEGLLKVAQSDDQLAAVVGHEIAHVLAKHGNERLTQELGIKTVLFIVGLFSEG
DADTENIRQALGVGAYLGIALPFSRSHEQEADAMGLELMASAGFDPLQSIQLWRNMAAAGGAQPMEFLSTHPNHDSRIKA
LEERMGNTLPLYHQASPVNCER
>Mature_262_residues
MRFFLLAILPLLLVGCDQTPTGRDQLALVPESMMADFGRQTFVQMQQQLPVGTGESARRKVQCVAEHLISRIPARFPGAT
MPTTWEVVLFADSTPNAFALPGGKIGVNEGLLKVAQSDDQLAAVVGHEIAHVLAKHGNERLTQELGIKTVLFIVGLFSEG
DADTENIRQALGVGAYLGIALPFSRSHEQEADAMGLELMASAGFDPLQSIQLWRNMAAAGGAQPMEFLSTHPNHDSRIKA
LEERMGNTLPLYHQASPVNCER

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=186, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=179, Percent_Identity=36.8715083798883, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 28424; Mature: 28424

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFLLAILPLLLVGCDQTPTGRDQLALVPESMMADFGRQTFVQMQQQLPVGTGESARRK
CHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VQCVAEHLISRIPARFPGATMPTTWEVVLFADSTPNAFALPGGKIGVNEGLLKVAQSDDQ
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCHHHHHHHCCCCH
LAAVVGHEIAHVLAKHGNERLTQELGIKTVLFIVGLFSEGDADTENIRQALGVGAYLGIA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHEE
LPFSRSHEQEADAMGLELMASAGFDPLQSIQLWRNMAAAGGAQPMEFLSTHPNHDSRIKA
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHH
LEERMGNTLPLYHQASPVNCER
HHHHCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MRFFLLAILPLLLVGCDQTPTGRDQLALVPESMMADFGRQTFVQMQQQLPVGTGESARRK
CHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VQCVAEHLISRIPARFPGATMPTTWEVVLFADSTPNAFALPGGKIGVNEGLLKVAQSDDQ
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCHHHHHHHCCCCH
LAAVVGHEIAHVLAKHGNERLTQELGIKTVLFIVGLFSEGDADTENIRQALGVGAYLGIA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHEE
LPFSRSHEQEADAMGLELMASAGFDPLQSIQLWRNMAAAGGAQPMEFLSTHPNHDSRIKA
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHH
LEERMGNTLPLYHQASPVNCER
HHHHCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]