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The map label for this gene is phaC1 [H]

Identifier: 110835075

GI number: 110835075

Start: 2526920

End: 2528080

Strand: Direct

Name: phaC1 [H]

Synonym: ABO_2214

Alternate gene names: 110835075

Gene position: 2526920-2528080 (Clockwise)

Preceding gene: 110835074

Following gene: 110835076

Centisome position: 80.99

GC content: 57.45

Gene sequence:

>1161_bases
TTGCCGGTGCAATTCATGCTCACAAACACCCTACAGCAGGCCGTTTACAAACGAACTCGCCCCTGGCGGCAACGCCTAGA
CAATGGCCGGGCTCGGCTGTTTGACGCTCAACAACTGAGCCAGGCAGAACAAACGCCCTACCAGACCCTGTTTGACGACG
GTCTGGTCAAATTGCGTTACTACCCGCCACTGAAAGAAAGCGCCATTCCTCTGGCGGACGGCACCGTCATTCCCGTCAGC
CAAGCGCCTCAGCGCACCCCGCTAGTATTGGTGGCACCGCTCGCCGTAAACATGCTGATCTATGACCTGTTTCCCCAGCG
CAGCTTGGTCCGTTACCTACGTGCTCGAGGTTTTGAGTTGTATATGGTCGACTGGGGCCGCCCAGGCAAGCATCACAACC
ACCTACATTTAAGCAGCTACTTTGCCGATTATCTGCCCAAGCTATTGGTGCATGTTCGCCAACACAGTGGCGAACAAAAG
CTGAGCCTACACGGCTGGAGCTTCGGCGGACTCTTCAGCCTATGCTACGCAGCCCTAGGCAAAGACCCTGATATCAGCAA
CCTAGTGCTGGTGGGGGCTCCCACGGATTATCACCGCAACGGCTCGCTGGGCAGCCAGTACCGAGCACTAAGCCGCCGGG
CAAAGTGGATCCGCAGCCGCACCGGCCTACGCATCCATAATGTCCCCTCCAACTTGCTGCGCTCACCGGGCTGGGTGAAC
AGCCTCGCGTTCAAATTCACCAATCCAATAGGTAGCCTGCAAGGTTACTGGAGCCTGATTAAGAACCTGCACGACCGAGA
ATTCGTCGCCTCCCATGCCACCAACGGGGCCTTTCTCGATGACATGGTGGCTTATCCTGGCGGTGTGATTCAGGACATCG
TCCACTACCTATGGACAGACAACGTAGTCGCCCATGGCCAGCTCCCCATGGAAGGAACCGACGGCCACCTGGACCGGGTC
ACTGCCAATGTGCTGAACATCACCGGCGCCAACGATCCCATCGTGACGCCAGAATGCAGCCAAGCCATGAAGCCCCTGAT
TCGCAGCAAGGACAAAACTTTTTTGACCATTGATGGCGGGCACATGGGCATCCTCGGCAGCGCCGCCGCCCAAAAACAAA
GCTGGGGTCGAATCGCGGACTGGTTGATCGAGCGAGATTAA

Upstream 100 bases:

>100_bases
GTTCATTGCGGCGGGCGAGTATCCCCCCTGACACTTCCCCCGGTCCGCACGGCAACTGCCCTCCCGTGGATCTACCCTAC
AATAACCGGCCGTTGATCTT

Downstream 100 bases:

>100_bases
CAGCAGCGAGGACAACGCGGGTTAGTAACGGCACCACACGGTGACCGCCCTGCCCGCGAGATCCTGTTGAAAGCGCAAAA
CAACAAGCCGAAAAAGTAAA

Product: polyhydroxyalkanoate synthase

Products: NA

Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MPVQFMLTNTLQQAVYKRTRPWRQRLDNGRARLFDAQQLSQAEQTPYQTLFDDGLVKLRYYPPLKESAIPLADGTVIPVS
QAPQRTPLVLVAPLAVNMLIYDLFPQRSLVRYLRARGFELYMVDWGRPGKHHNHLHLSSYFADYLPKLLVHVRQHSGEQK
LSLHGWSFGGLFSLCYAALGKDPDISNLVLVGAPTDYHRNGSLGSQYRALSRRAKWIRSRTGLRIHNVPSNLLRSPGWVN
SLAFKFTNPIGSLQGYWSLIKNLHDREFVASHATNGAFLDDMVAYPGGVIQDIVHYLWTDNVVAHGQLPMEGTDGHLDRV
TANVLNITGANDPIVTPECSQAMKPLIRSKDKTFLTIDGGHMGILGSAAAQKQSWGRIADWLIERD

Sequences:

>Translated_386_residues
MPVQFMLTNTLQQAVYKRTRPWRQRLDNGRARLFDAQQLSQAEQTPYQTLFDDGLVKLRYYPPLKESAIPLADGTVIPVS
QAPQRTPLVLVAPLAVNMLIYDLFPQRSLVRYLRARGFELYMVDWGRPGKHHNHLHLSSYFADYLPKLLVHVRQHSGEQK
LSLHGWSFGGLFSLCYAALGKDPDISNLVLVGAPTDYHRNGSLGSQYRALSRRAKWIRSRTGLRIHNVPSNLLRSPGWVN
SLAFKFTNPIGSLQGYWSLIKNLHDREFVASHATNGAFLDDMVAYPGGVIQDIVHYLWTDNVVAHGQLPMEGTDGHLDRV
TANVLNITGANDPIVTPECSQAMKPLIRSKDKTFLTIDGGHMGILGSAAAQKQSWGRIADWLIERD
>Mature_385_residues
PVQFMLTNTLQQAVYKRTRPWRQRLDNGRARLFDAQQLSQAEQTPYQTLFDDGLVKLRYYPPLKESAIPLADGTVIPVSQ
APQRTPLVLVAPLAVNMLIYDLFPQRSLVRYLRARGFELYMVDWGRPGKHHNHLHLSSYFADYLPKLLVHVRQHSGEQKL
SLHGWSFGGLFSLCYAALGKDPDISNLVLVGAPTDYHRNGSLGSQYRALSRRAKWIRSRTGLRIHNVPSNLLRSPGWVNS
LAFKFTNPIGSLQGYWSLIKNLHDREFVASHATNGAFLDDMVAYPGGVIQDIVHYLWTDNVVAHGQLPMEGTDGHLDRVT
ANVLNITGANDPIVTPECSQAMKPLIRSKDKTFLTIDGGHMGILGSAAAQKQSWGRIADWLIERD

Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR010125 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 43413; Mature: 43282

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVQFMLTNTLQQAVYKRTRPWRQRLDNGRARLFDAQQLSQAEQTPYQTLFDDGLVKLRY
CCEEHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECHHHHHHHHCCCHHHHHCCCCEEEEE
YPPLKESAIPLADGTVIPVSQAPQRTPLVLVAPLAVNMLIYDLFPQRSLVRYLRARGFEL
CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCEE
YMVDWGRPGKHHNHLHLSSYFADYLPKLLVHVRQHSGEQKLSLHGWSFGGLFSLCYAALG
EEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHC
KDPDISNLVLVGAPTDYHRNGSLGSQYRALSRRAKWIRSRTGLRIHNVPSNLLRSPGWVN
CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHH
SLAFKFTNPIGSLQGYWSLIKNLHDREFVASHATNGAFLDDMVAYPGGVIQDIVHYLWTD
HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCC
NVVAHGQLPMEGTDGHLDRVTANVLNITGANDPIVTPECSQAMKPLIRSKDKTFLTIDGG
CEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC
HMGILGSAAAQKQSWGRIADWLIERD
CEEEECHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVQFMLTNTLQQAVYKRTRPWRQRLDNGRARLFDAQQLSQAEQTPYQTLFDDGLVKLRY
CEEHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECHHHHHHHHCCCHHHHHCCCCEEEEE
YPPLKESAIPLADGTVIPVSQAPQRTPLVLVAPLAVNMLIYDLFPQRSLVRYLRARGFEL
CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCEE
YMVDWGRPGKHHNHLHLSSYFADYLPKLLVHVRQHSGEQKLSLHGWSFGGLFSLCYAALG
EEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHC
KDPDISNLVLVGAPTDYHRNGSLGSQYRALSRRAKWIRSRTGLRIHNVPSNLLRSPGWVN
CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHH
SLAFKFTNPIGSLQGYWSLIKNLHDREFVASHATNGAFLDDMVAYPGGVIQDIVHYLWTD
HHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCC
NVVAHGQLPMEGTDGHLDRVTANVLNITGANDPIVTPECSQAMKPLIRSKDKTFLTIDGG
CEEECCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCC
HMGILGSAAAQKQSWGRIADWLIERD
CEEEECHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1396692 [H]