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The map label for this gene is rfaQ [H]

Identifier: 110835076

GI number: 110835076

Start: 2528298

End: 2529341

Strand: Direct

Name: rfaQ [H]

Synonym: ABO_2215

Alternate gene names: 110835076

Gene position: 2528298-2529341 (Clockwise)

Preceding gene: 110835075

Following gene: 110835082

Centisome position: 81.03

GC content: 57.18

Gene sequence:

>1044_bases
ATGCCTCGCCTGCTGATTTTATTTCCGTGTAGTCATCTAGGTAATCTTCTGATTGCGTTACCCCATTTGCGTGCCATGCT
CTGTGCTCACACAGACGCTTTGCTGGTGGTAGATGAGCGCTATCAGGCGCTGGTGGCACAAAGTCTGCCGGGAGAACAGC
GGTTGCTTTTTTATCCGGAACAAGCGCTCTCACGCTCACAGTCTTTGTGGAAACGGATTCGTCGCTACCTTGCGTTTGTG
CGGGCCATGCGACGCTTTAAGGCCGACATCAGTGTGGACATCGAAGGTGAACAAAAATCCGCCACCTTAAGCCGTCTCTG
TGGGGCAGCAACGCGGATCGGCCCACCGCGCCGTCATGGCCGCTGGTTTTATAGCTTGTCGCTGGAGCCGGATTGGCAAG
GACACCGTTGGCACAGCTACGCCAGCTTGAGCCAACCTGCTGCGCCGTCAGCCCGCTACCTACCGCTTGCGGACTGTCCC
GGCAGTGACGCGGCTGTGCGCAACCTGCTATCCGGCCAGGCAGAAAACACATGTTTAGTGGTCCATGTCGGCGCCACAAA
AACCTACAAAATGTGGCACCCGGAGCAGTTCGCTTCACTCTGCCAGCGCGCACGCCGCGCCGGTCTTACACCGGTCCTGA
TCGGTGCAGGGCACAAAGACCGCATGCAAATCGCCAGGGTACAATCCTTTCTCTGCGAACCGGTGCTGGATCTGTGCGAT
CAACTCACTCTGTCGGAGTTGATTTCGCTGCTTCAGCACAGCCAGGGCTATGTGGGCAATGACAGCGGTCCAATGCACCT
GGCTGCCGCCTGCGGCATTCCTGTAGTCGCCCTATTCGGCCCCACGGATGAACACATTTGGCACCCATTATCTGACCAGG
CTCGAGTATTACGCTGGCAGCCTTGCGCCGCTAAATGTCAGCGCAGCAATTGCGTTCGAGATAGCTACCCCTGCCTGCAG
CGCATTACAGTGAATCAGGTAATGGATACCCTGTCGGAGCTAGGTGTCATTCCTCGCCCCCAGGCTCAGCGGATAAGTAG
GTAA

Upstream 100 bases:

>100_bases
TTTGCCCTATCCAATCGATCGCAGCTCGTCGCCTGTCATTTAACCGTCATCCCCGCCGCCTAGCCTAAACACCGTTTCCG
CTGATAACAGTATTTGTTTC

Downstream 100 bases:

>100_bases
GGCGCGATGACTGCCATCACAATCGGCCAATGATGGGCCTTGGGTCGTTGCACTGTTGTGCCCCCCTGTACCCCCCGTTA
AAGGTGACAATGGCGCGAAA

Product: heptosyltransferase II, putatative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MPRLLILFPCSHLGNLLIALPHLRAMLCAHTDALLVVDERYQALVAQSLPGEQRLLFYPEQALSRSQSLWKRIRRYLAFV
RAMRRFKADISVDIEGEQKSATLSRLCGAATRIGPPRRHGRWFYSLSLEPDWQGHRWHSYASLSQPAAPSARYLPLADCP
GSDAAVRNLLSGQAENTCLVVHVGATKTYKMWHPEQFASLCQRARRAGLTPVLIGAGHKDRMQIARVQSFLCEPVLDLCD
QLTLSELISLLQHSQGYVGNDSGPMHLAAACGIPVVALFGPTDEHIWHPLSDQARVLRWQPCAAKCQRSNCVRDSYPCLQ
RITVNQVMDTLSELGVIPRPQAQRISR

Sequences:

>Translated_347_residues
MPRLLILFPCSHLGNLLIALPHLRAMLCAHTDALLVVDERYQALVAQSLPGEQRLLFYPEQALSRSQSLWKRIRRYLAFV
RAMRRFKADISVDIEGEQKSATLSRLCGAATRIGPPRRHGRWFYSLSLEPDWQGHRWHSYASLSQPAAPSARYLPLADCP
GSDAAVRNLLSGQAENTCLVVHVGATKTYKMWHPEQFASLCQRARRAGLTPVLIGAGHKDRMQIARVQSFLCEPVLDLCD
QLTLSELISLLQHSQGYVGNDSGPMHLAAACGIPVVALFGPTDEHIWHPLSDQARVLRWQPCAAKCQRSNCVRDSYPCLQ
RITVNQVMDTLSELGVIPRPQAQRISR
>Mature_346_residues
PRLLILFPCSHLGNLLIALPHLRAMLCAHTDALLVVDERYQALVAQSLPGEQRLLFYPEQALSRSQSLWKRIRRYLAFVR
AMRRFKADISVDIEGEQKSATLSRLCGAATRIGPPRRHGRWFYSLSLEPDWQGHRWHSYASLSQPAAPSARYLPLADCPG
SDAAVRNLLSGQAENTCLVVHVGATKTYKMWHPEQFASLCQRARRAGLTPVLIGAGHKDRMQIARVQSFLCEPVLDLCDQ
LTLSELISLLQHSQGYVGNDSGPMHLAAACGIPVVALFGPTDEHIWHPLSDQARVLRWQPCAAKCQRSNCVRDSYPCLQR
ITVNQVMDTLSELGVIPRPQAQRISR

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=239, Percent_Identity=23.8493723849372, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1790050, Length=151, Percent_Identity=29.8013245033113, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 38853; Mature: 38722

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLLILFPCSHLGNLLIALPHLRAMLCAHTDALLVVDERYQALVAQSLPGEQRLLFYPE
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEECCH
QALSRSQSLWKRIRRYLAFVRAMRRFKADISVDIEGEQKSATLSRLCGAATRIGPPRRHG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCC
RWFYSLSLEPDWQGHRWHSYASLSQPAAPSARYLPLADCPGSDAAVRNLLSGQAENTCLV
CEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEE
VHVGATKTYKMWHPEQFASLCQRARRAGLTPVLIGAGHKDRMQIARVQSFLCEPVLDLCD
EEECCCCEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
QLTLSELISLLQHSQGYVGNDSGPMHLAAACGIPVVALFGPTDEHIWHPLSDQARVLRWQ
HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHCCCCCCHHHEEEEC
PCAAKCQRSNCVRDSYPCLQRITVNQVMDTLSELGVIPRPQAQRISR
CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
>Mature Secondary Structure 
PRLLILFPCSHLGNLLIALPHLRAMLCAHTDALLVVDERYQALVAQSLPGEQRLLFYPE
CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEECCH
QALSRSQSLWKRIRRYLAFVRAMRRFKADISVDIEGEQKSATLSRLCGAATRIGPPRRHG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCC
RWFYSLSLEPDWQGHRWHSYASLSQPAAPSARYLPLADCPGSDAAVRNLLSGQAENTCLV
CEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEE
VHVGATKTYKMWHPEQFASLCQRARRAGLTPVLIGAGHKDRMQIARVQSFLCEPVLDLCD
EEECCCCEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
QLTLSELISLLQHSQGYVGNDSGPMHLAAACGIPVVALFGPTDEHIWHPLSDQARVLRWQ
HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHCCCCCCHHHEEEEC
PCAAKCQRSNCVRDSYPCLQRITVNQVMDTLSELGVIPRPQAQRISR
CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA