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The map label for this gene is yfhC [C]

Identifier: 110632788

GI number: 110632788

Start: 472787

End: 473302

Strand: Reverse

Name: yfhC [C]

Synonym: Meso_0427

Alternate gene names: 110632788

Gene position: 473302-472787 (Counterclockwise)

Preceding gene: 110632794

Following gene: 110632783

Centisome position: 10.73

GC content: 62.6

Gene sequence:

>516_bases
TTGGACCGGCTAGGTATCAATTCGTCATCAGCGTTGCGAGCAAAAAGATTGGAACAGCAACGGCCGAAGGCTACGGCGAG
TTTCATGGATGCCGCCCTCCAGGAGGCGCGGCGCGCGGCTGCGCGCGCTGAGGTTCCGGTCGGAGCCGTAGTGGTACGCG
ACGGCAGGTTGCTTGCAAGTGCCGGAAACCGCACGCGCGAACTCAACGATCCCACTGCCCATGCCGAAATGCTTGCCATT
CGCGCAGCCTGCGAGGCAGAAGGGGCGGAGCGCCTTATCGGCGCTGATCTTTACGTAACGCTGGAACCTTGCGCCATGTG
CGCAGGCGCCATTTCCTTCGCCCGTATACGCCGGCTCTATTTCGGTGCGAGCGATCCCAAGGGCGGAGGAGTCATCCATG
GCGGGCGTTTCTTCACACAGCCCACCTGCCACCACGCGCCGGAGGTTTACGAGGGCCTCGGCGAGCGCGAAGCCGCAACG
CTGCTCAAGAATTTTTTCGCGGGGAAGCGGGAATAG

Upstream 100 bases:

>100_bases
GGGGAGCGCCTCCGGCAGCGGCCTTGCCCGCCGGCTTTCCACGTGGAGCGGTAGCTTTTTCCGATTTGTCTTTTCTATTC
TTCATGCTGGCCCGAGCCTC

Downstream 100 bases:

>100_bases
CGCCTTTTCGCAGGCCGCAAAGCCTTCGCGTTCGCCTCACCAGGGCCAGAGCCTGCGCAAGCCGCCGGTCTCGCTGCCCG
CGCGCTTGGCGGCGCGTTCC

Product: CMP/dCMP deaminase, zinc-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDRLGINSSSALRAKRLEQQRPKATASFMDAALQEARRAAARAEVPVGAVVVRDGRLLASAGNRTRELNDPTAHAEMLAI
RAACEAEGAERLIGADLYVTLEPCAMCAGAISFARIRRLYFGASDPKGGGVIHGGRFFTQPTCHHAPEVYEGLGEREAAT
LLKNFFAGKRE

Sequences:

>Translated_171_residues
MDRLGINSSSALRAKRLEQQRPKATASFMDAALQEARRAAARAEVPVGAVVVRDGRLLASAGNRTRELNDPTAHAEMLAI
RAACEAEGAERLIGADLYVTLEPCAMCAGAISFARIRRLYFGASDPKGGGVIHGGRFFTQPTCHHAPEVYEGLGEREAAT
LLKNFFAGKRE
>Mature_171_residues
MDRLGINSSSALRAKRLEQQRPKATASFMDAALQEARRAAARAEVPVGAVVVRDGRLLASAGNRTRELNDPTAHAEMLAI
RAACEAEGAERLIGADLYVTLEPCAMCAGAISFARIRRLYFGASDPKGGGVIHGGRFFTQPTCHHAPEVYEGLGEREAAT
LLKNFFAGKRE

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=159, Percent_Identity=28.9308176100629, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI145693172, Length=144, Percent_Identity=44.4444444444444, Blast_Score=114, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17554608, Length=114, Percent_Identity=35.9649122807018, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17541138, Length=144, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17555996, Length=109, Percent_Identity=39.4495412844037, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21355527, Length=149, Percent_Identity=33.5570469798658, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 18382; Mature: 18382

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLGINSSSALRAKRLEQQRPKATASFMDAALQEARRAAARAEVPVGAVVVRDGRLLAS
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEC
AGNRTRELNDPTAHAEMLAIRAACEAEGAERLIGADLYVTLEPCAMCAGAISFARIRRLY
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHH
FGASDPKGGGVIHGGRFFTQPTCHHAPEVYEGLGEREAATLLKNFFAGKRE
HCCCCCCCCCEEECCEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDRLGINSSSALRAKRLEQQRPKATASFMDAALQEARRAAARAEVPVGAVVVRDGRLLAS
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEC
AGNRTRELNDPTAHAEMLAIRAACEAEGAERLIGADLYVTLEPCAMCAGAISFARIRRLY
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHH
FGASDPKGGGVIHGGRFFTQPTCHHAPEVYEGLGEREAATLLKNFFAGKRE
HCCCCCCCCCEEECCEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA