Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is merA [H]
Identifier: 110632713
GI number: 110632713
Start: 394240
End: 395667
Strand: Reverse
Name: merA [H]
Synonym: Meso_0352
Alternate gene names: 110632713
Gene position: 395667-394240 (Counterclockwise)
Preceding gene: 110632714
Following gene: 110632712
Centisome position: 8.97
GC content: 59.8
Gene sequence:
>1428_bases ATGACCACCATCCTCAAACCTGACATTTGCGTGATCGGCGCAGGCTCGGGCGGATTGACCGTCGCGGCCGCGGCAGCGTC CCTTGGTGCTTCCGTCGTTCTTATCGAGCGGGGGAAGATGGGCGGAGATTGCCTCAACTATGGCTGCGTTCCTTCCAAAG CGCTGATCGCGTCCGCCAGACAGGCGCACCGGCTATCCCACGGAGGGAGTTTGGGAATTGCTGCTGTGGAACCTTCAATC GACTTCGCCCGCGTGGCTGGCCATATCGAGCAGGCAATCGCTGCGATTGCGCCCAACGATTCGAAAGAGCGCTTCACAGC GCTCGGCGTTGAGGTCATTTCAGCCCAAGGCCATTTCAAGGACCCACGGACCGTCGTGGCCGGAGGCAGTGAAATCCGCG CCCGTCGTTTCGTAATCGCAACCGGCTCCTCACCTGCCATTCCTCCGATCCCTGGGCTTTCTGATGTTCCCTTTCTCACG AACGAGACGACTTTCGGGCTGAAGCAAAGTCCGGCACACCTGATCATCGTCGGAGGAGGCCCCATAGGCATGGAGCGGGC GCAGGCGCACCGCCGGCTTGGCGCAGATGTTACGGTGCTCGAGGCCGATACCGTGCTCGGCAAGGAAGACCCTGAACTGG CCCTTGGGGTCAAGCAGGCTCTTTTGAAGGAAGGAGTCGCGATACTGGAACATGCGCGCGCCGAGCGCGTGGAGCGCTAC AAAGGAACCGGCATACGGGTTCATGTGGCGGATGAGAAGGGCGCACACAGCATCGACGGCTCGCACTTACTGATCGCCAC CGGGCGCAGACCGAATGTCGAGGCTCTGGCACTTGAAAATGCGGGCGTTGCCTATGGGCCGGGCGGTATCACGATTTCCC CTAAGCTCAGGACAACCAACCGACGCATTTTCGCCATTGGCGATGTGGCTGGCGGCCCGCAGTTCACGCATGTCGCGAAT TATCATGCGGGGCTGGTTATCCGCGCCATTCTTTTCCGCCTGCCTGTAAAGGCGAATCACGAACACATTCCCAGGGTGAC ATTCACCGACCCCGAACTCGCCCAAATCGGACTGACGGAAAACGAAGCCCGGAGGAGAGGCTTGCAGGTGAAGGTGCTGC GCTCCTCATTTTCCGAAAACGATCGGGCGCATGCCGAAGGACACACGGACGGTTTCATCAAGCTCATCGTGGGTCGGCGC GGACGCATTCTCGGCGTCTCGATTCTAGGCCGAGGCGCCGGTGAAATGATGCATTTCTGGTCCCTCGCACTCTCTCGACG CATGAGGGTGCACGATATTTCGCAATATGTTGCGCCCTACCCCACGCTTGGAGAAATCGGAAAGCGTGCCGCCCTCTCTT ATTTCGCCGAAGCGGCGCGCAGCTCATCCGTGCGTGGAATATTAGGCTTTTTGCGGCTATTTGGCTAA
Upstream 100 bases:
>100_bases TCCCTCGGCGGGCTTGCGGTGGTCGCAGCCCTTGCGGTCGTCGTAAAACGAAGGTTGAAAAGCAAGGCCACCGGGAGGGG CGAAGTGCCAATGGCGGGAA
Downstream 100 bases:
>100_bases GTAGGGTGATCATTGTGGGAACCACCACCTGTGCAGCAGCGGAACAGGAATGGCCGAGGAGAAGCGTCAGGAAGGAACCA AGACCGAATTAGACGCGAGT
Product: pyridine nucleotide-disulphide oxidoreductase dimerisation region
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MTTILKPDICVIGAGSGGLTVAAAAASLGASVVLIERGKMGGDCLNYGCVPSKALIASARQAHRLSHGGSLGIAAVEPSI DFARVAGHIEQAIAAIAPNDSKERFTALGVEVISAQGHFKDPRTVVAGGSEIRARRFVIATGSSPAIPPIPGLSDVPFLT NETTFGLKQSPAHLIIVGGGPIGMERAQAHRRLGADVTVLEADTVLGKEDPELALGVKQALLKEGVAILEHARAERVERY KGTGIRVHVADEKGAHSIDGSHLLIATGRRPNVEALALENAGVAYGPGGITISPKLRTTNRRIFAIGDVAGGPQFTHVAN YHAGLVIRAILFRLPVKANHEHIPRVTFTDPELAQIGLTENEARRRGLQVKVLRSSFSENDRAHAEGHTDGFIKLIVGRR GRILGVSILGRGAGEMMHFWSLALSRRMRVHDISQYVAPYPTLGEIGKRAALSYFAEAARSSSVRGILGFLRLFG
Sequences:
>Translated_475_residues MTTILKPDICVIGAGSGGLTVAAAAASLGASVVLIERGKMGGDCLNYGCVPSKALIASARQAHRLSHGGSLGIAAVEPSI DFARVAGHIEQAIAAIAPNDSKERFTALGVEVISAQGHFKDPRTVVAGGSEIRARRFVIATGSSPAIPPIPGLSDVPFLT NETTFGLKQSPAHLIIVGGGPIGMERAQAHRRLGADVTVLEADTVLGKEDPELALGVKQALLKEGVAILEHARAERVERY KGTGIRVHVADEKGAHSIDGSHLLIATGRRPNVEALALENAGVAYGPGGITISPKLRTTNRRIFAIGDVAGGPQFTHVAN YHAGLVIRAILFRLPVKANHEHIPRVTFTDPELAQIGLTENEARRRGLQVKVLRSSFSENDRAHAEGHTDGFIKLIVGRR GRILGVSILGRGAGEMMHFWSLALSRRMRVHDISQYVAPYPTLGEIGKRAALSYFAEAARSSSVRGILGFLRLFG >Mature_474_residues TTILKPDICVIGAGSGGLTVAAAAASLGASVVLIERGKMGGDCLNYGCVPSKALIASARQAHRLSHGGSLGIAAVEPSID FARVAGHIEQAIAAIAPNDSKERFTALGVEVISAQGHFKDPRTVVAGGSEIRARRFVIATGSSPAIPPIPGLSDVPFLTN ETTFGLKQSPAHLIIVGGGPIGMERAQAHRRLGADVTVLEADTVLGKEDPELALGVKQALLKEGVAILEHARAERVERYK GTGIRVHVADEKGAHSIDGSHLLIATGRRPNVEALALENAGVAYGPGGITISPKLRTTNRRIFAIGDVAGGPQFTHVANY HAGLVIRAILFRLPVKANHEHIPRVTFTDPELAQIGLTENEARRRGLQVKVLRSSFSENDRAHAEGHTDGFIKLIVGRRG RILGVSILGRGAGEMMHFWSLALSRRMRVHDISQYVAPYPTLGEIGKRAALSYFAEAARSSSVRGILGFLRLFG
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=467, Percent_Identity=31.6916488222698, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI50301238, Length=456, Percent_Identity=30.0438596491228, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI22035672, Length=465, Percent_Identity=25.5913978494624, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI148277065, Length=453, Percent_Identity=23.6203090507726, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI33519430, Length=453, Percent_Identity=23.6203090507726, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI33519428, Length=453, Percent_Identity=23.6203090507726, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI33519426, Length=453, Percent_Identity=23.6203090507726, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI148277071, Length=453, Percent_Identity=23.6203090507726, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI291045266, Length=455, Percent_Identity=23.5164835164835, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI291045268, Length=449, Percent_Identity=22.71714922049, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI87081717, Length=450, Percent_Identity=30, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1786307, Length=457, Percent_Identity=30.8533916849015, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI87082354, Length=462, Percent_Identity=26.4069264069264, Blast_Score=138, Evalue=8e-34, Organism=Escherichia coli, GI1789915, Length=431, Percent_Identity=29.2343387470998, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1789065, Length=194, Percent_Identity=28.3505154639175, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32565766, Length=467, Percent_Identity=29.9785867237687, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17557007, Length=475, Percent_Identity=27.7894736842105, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71983419, Length=430, Percent_Identity=28.3720930232558, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71983429, Length=430, Percent_Identity=28.3720930232558, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71982272, Length=486, Percent_Identity=24.4855967078189, Blast_Score=101, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6321091, Length=482, Percent_Identity=29.8755186721992, Blast_Score=170, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6325166, Length=466, Percent_Identity=27.8969957081545, Blast_Score=130, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6325240, Length=468, Percent_Identity=26.7094017094017, Blast_Score=126, Evalue=7e-30, Organism=Drosophila melanogaster, GI21358499, Length=464, Percent_Identity=32.1120689655172, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24640553, Length=469, Percent_Identity=26.4392324093817, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24640549, Length=469, Percent_Identity=26.4392324093817, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI24640551, Length=469, Percent_Identity=26.4392324093817, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI17737741, Length=479, Percent_Identity=25.4697286012526, Blast_Score=115, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 50283; Mature: 50151
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTILKPDICVIGAGSGGLTVAAAAASLGASVVLIERGKMGGDCLNYGCVPSKALIASAR CCCEECCCEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHCCCCCCHHHHHHHHH QAHRLSHGGSLGIAAVEPSIDFARVAGHIEQAIAAIAPNDSKERFTALGVEVISAQGHFK HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCEEEEECCCCCC DPRTVVAGGSEIRARRFVIATGSSPAIPPIPGLSDVPFLTNETTFGLKQSPAHLIIVGGG CCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC PIGMERAQAHRRLGADVTVLEADTVLGKEDPELALGVKQALLKEGVAILEHARAERVERY CCCHHHHHHHHHCCCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGTGIRVHVADEKGAHSIDGSHLLIATGRRPNVEALALENAGVAYGPGGITISPKLRTTN CCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEECCCCEEECCCEEECC RRIFAIGDVAGGPQFTHVANYHAGLVIRAILFRLPVKANHEHIPRVTFTDPELAQIGLTE CEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHEECCCC NEARRRGLQVKVLRSSFSENDRAHAEGHTDGFIKLIVGRRGRILGVSILGRGAGEMMHFW CHHHHCCCEEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHH SLALSRRMRVHDISQYVAPYPTLGEIGKRAALSYFAEAARSSSVRGILGFLRLFG HHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure TTILKPDICVIGAGSGGLTVAAAAASLGASVVLIERGKMGGDCLNYGCVPSKALIASAR CCEECCCEEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHCCCCCCHHHHHHHHH QAHRLSHGGSLGIAAVEPSIDFARVAGHIEQAIAAIAPNDSKERFTALGVEVISAQGHFK HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCEEEEECCCCCC DPRTVVAGGSEIRARRFVIATGSSPAIPPIPGLSDVPFLTNETTFGLKQSPAHLIIVGGG CCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC PIGMERAQAHRRLGADVTVLEADTVLGKEDPELALGVKQALLKEGVAILEHARAERVERY CCCHHHHHHHHHCCCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGTGIRVHVADEKGAHSIDGSHLLIATGRRPNVEALALENAGVAYGPGGITISPKLRTTN CCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEECCCCEEECCCEEECC RRIFAIGDVAGGPQFTHVANYHAGLVIRAILFRLPVKANHEHIPRVTFTDPELAQIGLTE CEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHEECCCC NEARRRGLQVKVLRSSFSENDRAHAEGHTDGFIKLIVGRRGRILGVSILGRGAGEMMHFW CHHHHCCCEEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHH SLALSRRMRVHDISQYVAPYPTLGEIGKRAALSYFAEAARSSSVRGILGFLRLFG HHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536669; 10559175; 2067577 [H]