Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632711
Identifier: 110632711
GI number: 110632711
Start: 390773
End: 392104
Strand: Direct
Name: 110632711
Synonym: Meso_0350
Alternate gene names: NA
Gene position: 390773-392104 (Clockwise)
Preceding gene: 110632710
Following gene: 110632721
Centisome position: 8.86
GC content: 62.91
Gene sequence:
>1332_bases ATGACCCCGTTGAAGCTTCCGGCCATCCGCAACTGCCTCGAGGGGATCGTCCCGTCTGTGCTCGCCACTGCTGATGCCAG CGGCACCCCGAACGTATCGTTGATATCCCAGGTTCAGTATGTCGATCCCGAGCACGTCGCGTTATCCTACCAGTTCTTCA ACAAGACCCGCCGCAATCTCCTGACGACGAAACGCGCCTCTGTGGCGGTCGTGGATCCCGACACCAACGCTCAGTACAGG CTGACGCTCGAATACCTCGAAACGCAGACGAGCGGGCCCCTTTTTGAGGCCATGCGCGCCAAGCTTGCCGGCATTGCCTC GCACAGCGGCATGCAGGGGGTCTTCCGTCTGCTCGGTTCGGATGTCTTCCGGGTTCAGGAGATCGAGGCGCTGCCCAGCA CGACCATGCCGCAGCCGATCGGCCTCAACCTTCTGTCGGCCGCGCGCCGCGCCTGCGAGCAGATTGCAACTTGCGACGAG TTGGGGGAGCTGTTTGACGCGGTGCTGGCGGGCCTGCAGCAGCATTTCGGCATCGAGCACTCCATGGTGATGATGCTCGA CCGTACCACGGACCGGCTCTACACCGTCGCCTCGCGTGGTTATCCGGTCTCCGGCATAGGATCGGAGGTCGGGTTGGGTG AAGGCGTCATCGGCGTAGCGGCTGCGCAATGCGTGCCGATCCGCATCGGCCGCATGGCGTCGGAATATTCCTACGGCACC GCAATTCGCGATACTGCGCGCGCGGCCGGGCTCCACTTGGAAGGCAATACGGCCATTCCCTATCCGGGGCTGAAGGCCCC CCAGAGCCAGATCGCAATGCCGATCCTCCACGATGGCAGCGCAATCGGAGTCCTCTTCGCCGAAAGCGCCGAGCCCAACC AGTTTGGCTATGAGGAGGAGGACGCCCTGTCGCTGGTCGCAAGCCACCTTTCGGCGTTGAGCCTCCTGTTGCAGCAGGAG GAAGCATTCGAGAAGGCCCCCTCGCGGGTTGCGCCGGGCGAAGTCACCGGCCGTGAAATACGTATTCGCCACTACCGCGC TGACAATACCGTGTTTGTCGGCAACGATTACCTCATCAAAGGTGTCGCCGGCGCGATCCTGTGGAAGATCGCACAGGAGC GCGCCGAGGGCGGCCGCATCGAATTCACCAATCGTGAGTTGCGCCTGGACCCGGCGCTGCGCTTGCCGGAATATGCTGAA AATCTTGAAGCACGACTGGTCCTGCTGCAGCGCCGTCTGTGCGAGCGCGACGCCGGCATCGCCATCGAAAAGTGCGGCCG CGGCCGGTTCCGATTTCTGGCTGAAGGCCGCCTTGTCCTGGAGGAGATATAA
Upstream 100 bases:
>100_bases TTTGCAGCGTCGACCCCGATACTGTCGTTGCAGTGGATTTTACCCTCGAAGCCGCCTTCGTGCAGACGCCTGGCCCCGGC GCGGGTGCGGAGCTGAACCC
Downstream 100 bases:
>100_bases GCCTCCAAGTATGGGAATGGCGACGAGGCAGAGATCTGCCAAAAGGCATAGGTTCAAATCCGGACTGGGATAGCGATCCA CCCGACTCGACTCAGGGGAG
Product: putative GAF sensor protein
Products: 3',5'-cyclic AMP; diphosphate
Alternate protein names: Phytochrome Sensor Protein; Adenylate/Guanylate Cyclase; Phosphoenolpyruvate-Protein Phosphotransferase; Adenylate Cyclase
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MTPLKLPAIRNCLEGIVPSVLATADASGTPNVSLISQVQYVDPEHVALSYQFFNKTRRNLLTTKRASVAVVDPDTNAQYR LTLEYLETQTSGPLFEAMRAKLAGIASHSGMQGVFRLLGSDVFRVQEIEALPSTTMPQPIGLNLLSAARRACEQIATCDE LGELFDAVLAGLQQHFGIEHSMVMMLDRTTDRLYTVASRGYPVSGIGSEVGLGEGVIGVAAAQCVPIRIGRMASEYSYGT AIRDTARAAGLHLEGNTAIPYPGLKAPQSQIAMPILHDGSAIGVLFAESAEPNQFGYEEEDALSLVASHLSALSLLLQQE EAFEKAPSRVAPGEVTGREIRIRHYRADNTVFVGNDYLIKGVAGAILWKIAQERAEGGRIEFTNRELRLDPALRLPEYAE NLEARLVLLQRRLCERDAGIAIEKCGRGRFRFLAEGRLVLEEI
Sequences:
>Translated_443_residues MTPLKLPAIRNCLEGIVPSVLATADASGTPNVSLISQVQYVDPEHVALSYQFFNKTRRNLLTTKRASVAVVDPDTNAQYR LTLEYLETQTSGPLFEAMRAKLAGIASHSGMQGVFRLLGSDVFRVQEIEALPSTTMPQPIGLNLLSAARRACEQIATCDE LGELFDAVLAGLQQHFGIEHSMVMMLDRTTDRLYTVASRGYPVSGIGSEVGLGEGVIGVAAAQCVPIRIGRMASEYSYGT AIRDTARAAGLHLEGNTAIPYPGLKAPQSQIAMPILHDGSAIGVLFAESAEPNQFGYEEEDALSLVASHLSALSLLLQQE EAFEKAPSRVAPGEVTGREIRIRHYRADNTVFVGNDYLIKGVAGAILWKIAQERAEGGRIEFTNRELRLDPALRLPEYAE NLEARLVLLQRRLCERDAGIAIEKCGRGRFRFLAEGRLVLEEI >Mature_442_residues TPLKLPAIRNCLEGIVPSVLATADASGTPNVSLISQVQYVDPEHVALSYQFFNKTRRNLLTTKRASVAVVDPDTNAQYRL TLEYLETQTSGPLFEAMRAKLAGIASHSGMQGVFRLLGSDVFRVQEIEALPSTTMPQPIGLNLLSAARRACEQIATCDEL GELFDAVLAGLQQHFGIEHSMVMMLDRTTDRLYTVASRGYPVSGIGSEVGLGEGVIGVAAAQCVPIRIGRMASEYSYGTA IRDTARAAGLHLEGNTAIPYPGLKAPQSQIAMPILHDGSAIGVLFAESAEPNQFGYEEEDALSLVASHLSALSLLLQQEE AFEKAPSRVAPGEVTGREIRIRHYRADNTVFVGNDYLIKGVAGAILWKIAQERAEGGRIEFTNRELRLDPALRLPEYAEN LEARLVLLQRRLCERDAGIAIEKCGRGRFRFLAEGRLVLEEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.6.1.1
Molecular weight: Translated: 48291; Mature: 48160
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLKLPAIRNCLEGIVPSVLATADASGTPNVSLISQVQYVDPEHVALSYQFFNKTRRNL CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHH LTTKRASVAVVDPDTNAQYRLTLEYLETQTSGPLFEAMRAKLAGIASHSGMQGVFRLLGS HHCCCCEEEEECCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC DVFRVQEIEALPSTTMPQPIGLNLLSAARRACEQIATCDELGELFDAVLAGLQQHFGIEH HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SMVMMLDRTTDRLYTVASRGYPVSGIGSEVGLGEGVIGVAAAQCVPIRIGRMASEYSYGT EEEEEEECCCHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC AIRDTARAAGLHLEGNTAIPYPGLKAPQSQIAMPILHDGSAIGVLFAESAEPNQFGYEEE HHHHHHHHCCEEECCCCCCCCCCCCCCHHHCCCEEEECCCEEEEEEECCCCCCCCCCCHH DALSLVASHLSALSLLLQQEEAFEKAPSRVAPGEVTGREIRIRHYRADNTVFVGNDYLIK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEECCCHHHH GVAGAILWKIAQERAEGGRIEFTNRELRLDPALRLPEYAENLEARLVLLQRRLCERDAGI HHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC AIEKCGRGRFRFLAEGRLVLEEI CHHHCCCCCEEEEECCCCHHHCC >Mature Secondary Structure TPLKLPAIRNCLEGIVPSVLATADASGTPNVSLISQVQYVDPEHVALSYQFFNKTRRNL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHH LTTKRASVAVVDPDTNAQYRLTLEYLETQTSGPLFEAMRAKLAGIASHSGMQGVFRLLGS HHCCCCEEEEECCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC DVFRVQEIEALPSTTMPQPIGLNLLSAARRACEQIATCDELGELFDAVLAGLQQHFGIEH HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SMVMMLDRTTDRLYTVASRGYPVSGIGSEVGLGEGVIGVAAAQCVPIRIGRMASEYSYGT EEEEEEECCCHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC AIRDTARAAGLHLEGNTAIPYPGLKAPQSQIAMPILHDGSAIGVLFAESAEPNQFGYEEE HHHHHHHHCCEEECCCCCCCCCCCCCCHHHCCCEEEECCCEEEEEEECCCCCCCCCCCHH DALSLVASHLSALSLLLQQEEAFEKAPSRVAPGEVTGREIRIRHYRADNTVFVGNDYLIK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEECCCHHHH GVAGAILWKIAQERAEGGRIEFTNRELRLDPALRLPEYAENLEARLVLLQRRLCERDAGI HHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC AIEKCGRGRFRFLAEGRLVLEEI CHHHCCCCCEEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP
Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA