Definition | Mesorhizobium sp. BNC1, complete genome. |
---|---|
Accession | NC_008254 |
Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110632710
Identifier: 110632710
GI number: 110632710
Start: 390225
End: 390776
Strand: Direct
Name: 110632710
Synonym: Meso_0349
Alternate gene names: NA
Gene position: 390225-390776 (Clockwise)
Preceding gene: 110632703
Following gene: 110632711
Centisome position: 8.84
GC content: 67.75
Gene sequence:
>552_bases ATGCCACGTGCATCCCAGCCTCATACGCCGGATATCGATCTGGCCGCCCGCCGCGCCTACGCGGCAGAGGGCGGCACTTC TGGCGTGCTGACGCCCGAGCTCGCGGCTTTTTGTCAGAGCGGCCTCAGCGTGATCGTCGCGGTGTGCCGCCCGGCCGAAG CGCCGGTCGCCGGCCTGGGATGCGGCTGCCTCATTCTGCCCGAGGATCGGATGCGGCTCCTGCTGCCGCGACCGGGCAAC GAGGCGCTGCTGGCGATGGTGGAGCGCGGGGCCGGCATTGCCGTCACATTCAGTCAGCCCGTTACCCACCGTTCGATCCA GGTGAAGGGATCGCGAGCCGTCGTCACTATGCCGGACGAAGGGGACAGGCTGGAAGCAGTGCGGCAGAGCCAGGGCATGC GCTGGGAGCTGGTCGAGGTCGGTTATCCTCCGGCCTTTGCGGAGGCGTTTTGCAGCGTCGACCCCGATACTGTCGTTGCA GTGGATTTTACCCTCGAAGCCGCCTTCGTGCAGACGCCTGGCCCCGGCGCGGGTGCGGAGCTGAACCCATGA
Upstream 100 bases:
>100_bases GGTCCTGCAAGAAATCGTAAAAGAATGCTAAAATAGGCGGAGGGGCATTTTCTTACGTCCATTAAGGCCAACCACTCGAC GGAGCGATAGCAGGCGAGCC
Downstream 100 bases:
>100_bases CCCCGTTGAAGCTTCCGGCCATCCGCAACTGCCTCGAGGGGATCGTCCCGTCTGTGCTCGCCACTGCTGATGCCAGCGGC ACCCCGAACGTATCGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MPRASQPHTPDIDLAARRAYAAEGGTSGVLTPELAAFCQSGLSVIVAVCRPAEAPVAGLGCGCLILPEDRMRLLLPRPGN EALLAMVERGAGIAVTFSQPVTHRSIQVKGSRAVVTMPDEGDRLEAVRQSQGMRWELVEVGYPPAFAEAFCSVDPDTVVA VDFTLEAAFVQTPGPGAGAELNP
Sequences:
>Translated_183_residues MPRASQPHTPDIDLAARRAYAAEGGTSGVLTPELAAFCQSGLSVIVAVCRPAEAPVAGLGCGCLILPEDRMRLLLPRPGN EALLAMVERGAGIAVTFSQPVTHRSIQVKGSRAVVTMPDEGDRLEAVRQSQGMRWELVEVGYPPAFAEAFCSVDPDTVVA VDFTLEAAFVQTPGPGAGAELNP >Mature_182_residues PRASQPHTPDIDLAARRAYAAEGGTSGVLTPELAAFCQSGLSVIVAVCRPAEAPVAGLGCGCLILPEDRMRLLLPRPGNE ALLAMVERGAGIAVTFSQPVTHRSIQVKGSRAVVTMPDEGDRLEAVRQSQGMRWELVEVGYPPAFAEAFCSVDPDTVVAV DFTLEAAFVQTPGPGAGAELNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19165; Mature: 19034
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRASQPHTPDIDLAARRAYAAEGGTSGVLTPELAAFCQSGLSVIVAVCRPAEAPVAGLG CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEHHHHCCCCCCCCCCC CGCLILPEDRMRLLLPRPGNEALLAMVERGAGIAVTFSQPVTHRSIQVKGSRAVVTMPDE CCEEEECCCCEEEEECCCCCHHHHHEECCCCCEEEEECCCCCCCEEEEECCEEEEECCCC GDRLEAVRQSQGMRWELVEVGYPPAFAEAFCSVDPDTVVAVDFTLEAAFVQTPGPGAGAE CCHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCC LNP CCC >Mature Secondary Structure PRASQPHTPDIDLAARRAYAAEGGTSGVLTPELAAFCQSGLSVIVAVCRPAEAPVAGLG CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEEHHHHCCCCCCCCCCC CGCLILPEDRMRLLLPRPGNEALLAMVERGAGIAVTFSQPVTHRSIQVKGSRAVVTMPDE CCEEEECCCCEEEEECCCCCHHHHHEECCCCCEEEEECCCCCCCEEEEECCEEEEECCCC GDRLEAVRQSQGMRWELVEVGYPPAFAEAFCSVDPDTVVAVDFTLEAAFVQTPGPGAGAE CCHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCCCC LNP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA