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The map label for this gene is ybhR [H]

Identifier: 110632494

GI number: 110632494

Start: 162079

End: 163191

Strand: Direct

Name: ybhR [H]

Synonym: Meso_0132

Alternate gene names: 110632494

Gene position: 162079-163191 (Clockwise)

Preceding gene: 110632493

Following gene: 110632496

Centisome position: 3.67

GC content: 62.17

Gene sequence:

>1113_bases
ATGTGGTGGACGCGGCTCAAAGCACTCATCATCAAGGAATTGCTGGCGATCCTGCGCGATCCGCGCGGGCGGCTGATCCT
CATCGGCCCGCCGATACTGCAACTCGTCATCTTCTCCTACGCCGCGACGCTCGAAGTGAAGAATATCGACGTACTCGTGC
TCAACCAGGATTCCGGCGCCTGGAGCCAGGAACTCGTCAACCGCATCGCCGGCGCGCCCACTTTCCGCAGTATCGAGAGG
GTTGGAAGCCCGGACGCGCTGCGCGCCCGCATCGACGCGCAGCAGGCGATCGCAGCCATCCATATCGGCCCGACCTTCTC
GGGCGATATTGCCGCCGGCCGGCCTGCCGACCTGCAGATCATCCTGGACGGGCGGCGCTCCAACGCCGCCCAGATCGTCG
CGGGCTATCTCAACCAGATCGTAAACCAGCTTTCCGCCGAAATAGGCGCCGGAGCGCGCGGCGCCGGACAGGCCGTCACC
GTGGTGCCACGCAACTGGTTCAACCAGAATCTCATCTTCCAATGGTTCATGGTGCCCAATCTGGTCGCCGCCATCGCGCT
TCTCATAGGCCTGGTGGTCACCGCGCTTTCCATTGCGCGCGAGCGCGAGCTCGGCACTTTCGACCAGCTCATGGTCTCGC
CGCTCAGGACGCATGAGATCCTGATCGGCAAGGTGATTCCGCCCATGATCATCGGCACCTTCCACATGACGATCTACATC
CTGGCGGCTGTGTTCATCTTCGGCGTGCCGCTTCGGGGCTCGCTCCTTATGCTCTATGGCAGCAGCATCTTTTACCTGCT
CTCGGTGGTGGGCGTCGGCCTCTTCATCTCCGCCCTTTCGATGACGCAGCAGCAGGCGATCCTCGGCGCCTTCCTCTTCA
TGGTGCCGGCAATGCTCCTCTCCGGCTTCGCCACGCCGATTGAGAACATGCCGGACTGGCTGCAGCCAATCACCTATGCC
AGTCCGCTGCGCTATTTCCTCGTCATCGTGCGGGGCGTGTTCTTGAAGGACTTGCCTTTCAACGAAGCGATGAACAACAC
GATCCCGCTCGCCATCATCGCCTTTCTCACGCTCGCGGCTGCGGCATGGCTCTTCCGACGCAGAATGGAGTGA

Upstream 100 bases:

>100_bases
ATCTGGCCCATGTTCTTGCGTTCGATTGCTGTGATGCTCACCATCGGCGCGGTGCTTTTCATTCTCGCCGCCCGCAGCAC
CCGCAAGAGGATCGCGTGAC

Downstream 100 bases:

>100_bases
AGATGAAATCACTCCGGCAGTGAGATTCCGTAGATCTCCGCGAGTTGCCCAATCATGAGATCGGCCGCGATCACGCCACC
CGCCGTGTTCCAGATGGCAT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MWWTRLKALIIKELLAILRDPRGRLILIGPPILQLVIFSYAATLEVKNIDVLVLNQDSGAWSQELVNRIAGAPTFRSIER
VGSPDALRARIDAQQAIAAIHIGPTFSGDIAAGRPADLQIILDGRRSNAAQIVAGYLNQIVNQLSAEIGAGARGAGQAVT
VVPRNWFNQNLIFQWFMVPNLVAAIALLIGLVVTALSIARERELGTFDQLMVSPLRTHEILIGKVIPPMIIGTFHMTIYI
LAAVFIFGVPLRGSLLMLYGSSIFYLLSVVGVGLFISALSMTQQQAILGAFLFMVPAMLLSGFATPIENMPDWLQPITYA
SPLRYFLVIVRGVFLKDLPFNEAMNNTIPLAIIAFLTLAAAAWLFRRRME

Sequences:

>Translated_370_residues
MWWTRLKALIIKELLAILRDPRGRLILIGPPILQLVIFSYAATLEVKNIDVLVLNQDSGAWSQELVNRIAGAPTFRSIER
VGSPDALRARIDAQQAIAAIHIGPTFSGDIAAGRPADLQIILDGRRSNAAQIVAGYLNQIVNQLSAEIGAGARGAGQAVT
VVPRNWFNQNLIFQWFMVPNLVAAIALLIGLVVTALSIARERELGTFDQLMVSPLRTHEILIGKVIPPMIIGTFHMTIYI
LAAVFIFGVPLRGSLLMLYGSSIFYLLSVVGVGLFISALSMTQQQAILGAFLFMVPAMLLSGFATPIENMPDWLQPITYA
SPLRYFLVIVRGVFLKDLPFNEAMNNTIPLAIIAFLTLAAAAWLFRRRME
>Mature_370_residues
MWWTRLKALIIKELLAILRDPRGRLILIGPPILQLVIFSYAATLEVKNIDVLVLNQDSGAWSQELVNRIAGAPTFRSIER
VGSPDALRARIDAQQAIAAIHIGPTFSGDIAAGRPADLQIILDGRRSNAAQIVAGYLNQIVNQLSAEIGAGARGAGQAVT
VVPRNWFNQNLIFQWFMVPNLVAAIALLIGLVVTALSIARERELGTFDQLMVSPLRTHEILIGKVIPPMIIGTFHMTIYI
LAAVFIFGVPLRGSLLMLYGSSIFYLLSVVGVGLFISALSMTQQQAILGAFLFMVPAMLLSGFATPIENMPDWLQPITYA
SPLRYFLVIVRGVFLKDLPFNEAMNNTIPLAIIAFLTLAAAAWLFRRRME

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=365, Percent_Identity=44.6575342465753, Blast_Score=317, Evalue=1e-87,
Organism=Escherichia coli, GI1787011, Length=342, Percent_Identity=33.9181286549708, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI48994943, Length=369, Percent_Identity=30.6233062330623, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI226510979, Length=345, Percent_Identity=26.9565217391304, Blast_Score=104, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40601; Mature: 40601

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWWTRLKALIIKELLAILRDPRGRLILIGPPILQLVIFSYAATLEVKNIDVLVLNQDSGA
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHEEEECEEEEEEECCCCC
WSQELVNRIAGAPTFRSIERVGSPDALRARIDAQQAIAAIHIGPTFSGDIAAGRPADLQI
HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEE
ILDGRRSNAAQIVAGYLNQIVNQLSAEIGAGARGAGQAVTVVPRNWFNQNLIFQWFMVPN
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
LVAAIALLIGLVVTALSIARERELGTFDQLMVSPLRTHEILIGKVIPPMIIGTFHMTIYI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAVFIFGVPLRGSLLMLYGSSIFYLLSVVGVGLFISALSMTQQQAILGAFLFMVPAMLL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFATPIENMPDWLQPITYASPLRYFLVIVRGVFLKDLPFNEAMNNTIPLAIIAFLTLAA
HHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH
AAWLFRRRME
HHHHHHHHCC
>Mature Secondary Structure
MWWTRLKALIIKELLAILRDPRGRLILIGPPILQLVIFSYAATLEVKNIDVLVLNQDSGA
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHEEEECEEEEEEECCCCC
WSQELVNRIAGAPTFRSIERVGSPDALRARIDAQQAIAAIHIGPTFSGDIAAGRPADLQI
HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEE
ILDGRRSNAAQIVAGYLNQIVNQLSAEIGAGARGAGQAVTVVPRNWFNQNLIFQWFMVPN
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
LVAAIALLIGLVVTALSIARERELGTFDQLMVSPLRTHEILIGKVIPPMIIGTFHMTIYI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAVFIFGVPLRGSLLMLYGSSIFYLLSVVGVGLFISALSMTQQQAILGAFLFMVPAMLL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFATPIENMPDWLQPITYASPLRYFLVIVRGVFLKDLPFNEAMNNTIPLAIIAFLTLAA
HHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH
AAWLFRRRME
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]