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The map label for this gene is ybhS [H]

Identifier: 110632493

GI number: 110632493

Start: 160941

End: 162077

Strand: Direct

Name: ybhS [H]

Synonym: Meso_0131

Alternate gene names: 110632493

Gene position: 160941-162077 (Clockwise)

Preceding gene: 110632492

Following gene: 110632494

Centisome position: 3.65

GC content: 64.2

Gene sequence:

>1137_bases
ATGAGCACGGAAGCGCCACCAACCGGGCGGGCGCGCCGCTTCGCCGCCCTCGTGCGCAAGGAGAGCCTGCAGGTGATCCG
CGATCCGAGTAGTATCCTGATCGCATTCGTGCTGCCGCTCATCCTCCTCGTCATCTTCGGCTATGGCGTTTCGCTCGATG
CCACCCGCACGCGCATCGGCCTGGTGATCGAGGATGCCACTCCCATCGCCCAGGATCTCGCCGCCAGCTTCCAGGCCTCG
CGCTATTTCGAGGTGGCGGTGGGGCGCGACCGGCGCGACTTCGAGGAAGACCTGATCCTTGGCCGCGTGCGCGGTATCGT
CGTGATCCCGGCGAGTTTCGCCGATGTGGGCGCCGCTGGGGGCTCACCGCAAATCCAGGTGAATGTCGACGGATCTGACC
CGAACACGGCCAATTTCGTGCAGAACTATGCGCAGGGCGTGGTGGGCACATGGATGGCGCAGCGCGCGGCGGAAATGGCC
ATGCGGCCGCCGCCGATCTCGGTCGAGCAGCGCTTCTGGTTCAACCCGGAGCTTGCCAGCCGCAATTTCCTCGTGCCCGG
CTCCATCGCGATCGTCATGACGCTGGTCGGCACGCTTCTTACCTCCCTCGTCGTCGCCCGTGAATGGGAGCGGGGCACTA
TGGAGGCGATGATGGCGACACCCGTCGCGGCGGCAGAACTGCTGGCGGGGAAGATCTTACCCTATTTCATTCTCGGCCTT
GTCTCCATGTCGCTCTGCGTGCTGATCGCCGTCTTCGTCTTCGGAGTGCCGTTCCGCGGTTCGGTGCTGGCGCTCTATGC
GCTTTCGGCAAGCTTCCTCATGCCAGCGCTCGGGCAGGGCCTTCTCATCTCGGCCGCGACCAAGAACCAGTTCCTCGCCT
CGCAGCTCGCGCTGCTCTCCGCCTTCCTGCCCGCCTTCCTGCTCTCGGGCTTCCTGTTCGAGATCAGTTCAATGCCGTGG
ATCATCCGCATGATCACCACCATCGTGCCCGCGCGCTACCTGATCCCAAGCCTTCAGAGCGTATTCGTCGCAGGCGACAT
CTGGCCCATGTTCTTGCGTTCGATTGCTGTGATGCTCACCATCGGCGCGGTGCTTTTCATTCTCGCCGCCCGCAGCACCC
GCAAGAGGATCGCGTGA

Upstream 100 bases:

>100_bases
ACGAATTGAAGGCGAGCGTCGCGGGCAAGGACATCCCCGACCCGACGATGGAGGACGCCTTCATCGCGCTGGTGCAGAAC
TCCGATCTGGCGGAGACCGC

Downstream 100 bases:

>100_bases
CATGTGGTGGACGCGGCTCAAAGCACTCATCATCAAGGAATTGCTGGCGATCCTGCGCGATCCGCGCGGGCGGCTGATCC
TCATCGGCCCGCCGATACTG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSTEAPPTGRARRFAALVRKESLQVIRDPSSILIAFVLPLILLVIFGYGVSLDATRTRIGLVIEDATPIAQDLAASFQAS
RYFEVAVGRDRRDFEEDLILGRVRGIVVIPASFADVGAAGGSPQIQVNVDGSDPNTANFVQNYAQGVVGTWMAQRAAEMA
MRPPPISVEQRFWFNPELASRNFLVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVAAAELLAGKILPYFILGL
VSMSLCVLIAVFVFGVPFRGSVLALYALSASFLMPALGQGLLISAATKNQFLASQLALLSAFLPAFLLSGFLFEISSMPW
IIRMITTIVPARYLIPSLQSVFVAGDIWPMFLRSIAVMLTIGAVLFILAARSTRKRIA

Sequences:

>Translated_378_residues
MSTEAPPTGRARRFAALVRKESLQVIRDPSSILIAFVLPLILLVIFGYGVSLDATRTRIGLVIEDATPIAQDLAASFQAS
RYFEVAVGRDRRDFEEDLILGRVRGIVVIPASFADVGAAGGSPQIQVNVDGSDPNTANFVQNYAQGVVGTWMAQRAAEMA
MRPPPISVEQRFWFNPELASRNFLVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVAAAELLAGKILPYFILGL
VSMSLCVLIAVFVFGVPFRGSVLALYALSASFLMPALGQGLLISAATKNQFLASQLALLSAFLPAFLLSGFLFEISSMPW
IIRMITTIVPARYLIPSLQSVFVAGDIWPMFLRSIAVMLTIGAVLFILAARSTRKRIA
>Mature_377_residues
STEAPPTGRARRFAALVRKESLQVIRDPSSILIAFVLPLILLVIFGYGVSLDATRTRIGLVIEDATPIAQDLAASFQASR
YFEVAVGRDRRDFEEDLILGRVRGIVVIPASFADVGAAGGSPQIQVNVDGSDPNTANFVQNYAQGVVGTWMAQRAAEMAM
RPPPISVEQRFWFNPELASRNFLVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVAAAELLAGKILPYFILGLV
SMSLCVLIAVFVFGVPFRGSVLALYALSASFLMPALGQGLLISAATKNQFLASQLALLSAFLPAFLLSGFLFEISSMPWI
IRMITTIVPARYLIPSLQSVFVAGDIWPMFLRSIAVMLTIGAVLFILAARSTRKRIA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=369, Percent_Identity=47.9674796747967, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI48994943, Length=381, Percent_Identity=29.6587926509186, Blast_Score=161, Evalue=8e-41,
Organism=Escherichia coli, GI1787010, Length=353, Percent_Identity=26.628895184136, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI226510979, Length=297, Percent_Identity=28.2828282828283, Blast_Score=80, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24650855, Length=367, Percent_Identity=22.8882833787466, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24650853, Length=367, Percent_Identity=22.8882833787466, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40872; Mature: 40741

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEAPPTGRARRFAALVRKESLQVIRDPSSILIAFVLPLILLVIFGYGVSLDATRTRIG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEE
LVIEDATPIAQDLAASFQASRYFEVAVGRDRRDFEEDLILGRVRGIVVIPASFADVGAAG
EEEECCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCEEEEECCHHHHCCCC
GSPQIQVNVDGSDPNTANFVQNYAQGVVGTWMAQRAAEMAMRPPPISVEQRFWFNPELAS
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RNFLVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVAAAELLAGKILPYFILGL
CCEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSMSLCVLIAVFVFGVPFRGSVLALYALSASFLMPALGQGLLISAATKNQFLASQLALLS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH
AFLPAFLLSGFLFEISSMPWIIRMITTIVPARYLIPSLQSVFVAGDIWPMFLRSIAVMLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IGAVLFILAARSTRKRIA
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STEAPPTGRARRFAALVRKESLQVIRDPSSILIAFVLPLILLVIFGYGVSLDATRTRIG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEE
LVIEDATPIAQDLAASFQASRYFEVAVGRDRRDFEEDLILGRVRGIVVIPASFADVGAAG
EEEECCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCEEEEECCHHHHCCCC
GSPQIQVNVDGSDPNTANFVQNYAQGVVGTWMAQRAAEMAMRPPPISVEQRFWFNPELAS
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RNFLVPGSIAIVMTLVGTLLTSLVVAREWERGTMEAMMATPVAAAELLAGKILPYFILGL
CCEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSMSLCVLIAVFVFGVPFRGSVLALYALSASFLMPALGQGLLISAATKNQFLASQLALLS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH
AFLPAFLLSGFLFEISSMPWIIRMITTIVPARYLIPSLQSVFVAGDIWPMFLRSIAVMLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IGAVLFILAARSTRKRIA
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]