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The map label for this gene is yfiZ [H]

Identifier: 110632496

GI number: 110632496

Start: 164198

End: 165214

Strand: Direct

Name: yfiZ [H]

Synonym: Meso_0134

Alternate gene names: 110632496

Gene position: 164198-165214 (Clockwise)

Preceding gene: 110632494

Following gene: 110632497

Centisome position: 3.72

GC content: 64.8

Gene sequence:

>1017_bases
TTGAGCAGATCCGCCCACATTGTTTTGACCGCAGCCGAAAGCCGGCTGCCGCTGATCTATGCGGGTCTGGCGCTTTTGCT
GGCCTTTGCGGTGCTTGGCAGCCTGATGCTGGGCTACACAATCTACATGCCCGGTGAGCTTTGGAATGCCCTCGCGAGCT
CCGGAACGAGCGAAGCGGATACGGTGATCCGTGAATACCGCCTGCCGCGCGCGATGATGGCGCCTTTGGTCGGGGCGGCG
CTCGGCGTGGCGGGGGTCATGGTACAGACACTTTCGCGCAACCGCATTGCCTCGCCGGATACGCTGGGGCTCAACGCCGG
CGCTTCGCTGGCTGTCGTGGCCGCGAGCGTAGGACTTGGCATCTCCTCGCTCGCAGTGCTTTCGCTCGTTGCGGCGGCGG
GCGCCTTTTTAACGAGCATTCTCGTCTTTGCCTTGGCCGCCACGGCTGGCGGGCTGTCGCCGCTGCGCATCGTGCTGGTG
GGGGTGACATTCGCGGCGCTCATGAACGCCATGGTCGAGGTGATCCTGACCGTCAACGAGGCCGAACTGCAGCAACTGCT
GTTCTGGCTTTCCGGCGCTTTTGTCGACCGGCCATTGAGCCTAGTGGCGCGCAACATTCCATTGTTGGCGTTGGGAGGTG
TAATGGCGGCTATGCTTGCCCGTCCGCTCGACGCATTGCAGACGGACGATGCCACCGCCCAAAGCCTTGGCGCGCCGATT
CGCGTGATCCGTATCGCCAGCTTCGTTGCCGTCGCGCTCCTTACTGGGGCTTCCGTGGCCATGGCCGGCCCTGTCGGCTT
TGTCGGCCTCGTCGTGCCGCATGCAGCCCGCGCGCTGGTCGGTGCCCGACATGGTGAAAAGCTGGTGGCCGCGGCGCTGA
TCGGCGCGGTCTATACGACTGCGGCCGATATTCTGGCCCGCTTCGTGATCTATCCCACTGAAGCGCCGGTAGGCGCGATT
ACGGCCGTTGTGGGCGCCGGCCTTCTTCTCGTTCTCCTGCGCCGGCGGGCCGCATGA

Upstream 100 bases:

>100_bases
GAGAGCAGCCGGCGACGGTTCATGGGGCACCTAACTTGACAAGCATGGTCAGAATTTGGGAGAGCAAGAGCAGAAGCAAA
CTTGACTGTCAACATCACCT

Downstream 100 bases:

>100_bases
TGGGCGAGGCGGCGAAGCTTTCCCGCAGCGGGCCCGCGCTTGGCGGCATCGCACGCGATCGTGCGCGGGCGGTCACGGTC
CTCTTGATCCTCCTCATCGT

Product: transport system permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSRSAHIVLTAAESRLPLIYAGLALLLAFAVLGSLMLGYTIYMPGELWNALASSGTSEADTVIREYRLPRAMMAPLVGAA
LGVAGVMVQTLSRNRIASPDTLGLNAGASLAVVAASVGLGISSLAVLSLVAAAGAFLTSILVFALAATAGGLSPLRIVLV
GVTFAALMNAMVEVILTVNEAELQQLLFWLSGAFVDRPLSLVARNIPLLALGGVMAAMLARPLDALQTDDATAQSLGAPI
RVIRIASFVAVALLTGASVAMAGPVGFVGLVVPHAARALVGARHGEKLVAAALIGAVYTTAADILARFVIYPTEAPVGAI
TAVVGAGLLLVLLRRRAA

Sequences:

>Translated_338_residues
MSRSAHIVLTAAESRLPLIYAGLALLLAFAVLGSLMLGYTIYMPGELWNALASSGTSEADTVIREYRLPRAMMAPLVGAA
LGVAGVMVQTLSRNRIASPDTLGLNAGASLAVVAASVGLGISSLAVLSLVAAAGAFLTSILVFALAATAGGLSPLRIVLV
GVTFAALMNAMVEVILTVNEAELQQLLFWLSGAFVDRPLSLVARNIPLLALGGVMAAMLARPLDALQTDDATAQSLGAPI
RVIRIASFVAVALLTGASVAMAGPVGFVGLVVPHAARALVGARHGEKLVAAALIGAVYTTAADILARFVIYPTEAPVGAI
TAVVGAGLLLVLLRRRAA
>Mature_337_residues
SRSAHIVLTAAESRLPLIYAGLALLLAFAVLGSLMLGYTIYMPGELWNALASSGTSEADTVIREYRLPRAMMAPLVGAAL
GVAGVMVQTLSRNRIASPDTLGLNAGASLAVVAASVGLGISSLAVLSLVAAAGAFLTSILVFALAATAGGLSPLRIVLVG
VTFAALMNAMVEVILTVNEAELQQLLFWLSGAFVDRPLSLVARNIPLLALGGVMAAMLARPLDALQTDDATAQSLGAPIR
VIRIASFVAVALLTGASVAMAGPVGFVGLVVPHAARALVGARHGEKLVAAALIGAVYTTAADILARFVIYPTEAPVGAIT
AVVGAGLLLVLLRRRAA

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=290, Percent_Identity=38.6206896551724, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1786805, Length=289, Percent_Identity=39.1003460207612, Blast_Score=142, Evalue=5e-35,
Organism=Escherichia coli, GI1790741, Length=284, Percent_Identity=34.1549295774648, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788004, Length=296, Percent_Identity=33.7837837837838, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786804, Length=276, Percent_Identity=37.3188405797101, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1786347, Length=278, Percent_Identity=31.294964028777, Blast_Score=108, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34346; Mature: 34215

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSAHIVLTAAESRLPLIYAGLALLLAFAVLGSLMLGYTIYMPGELWNALASSGTSEAD
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCHHH
TVIREYRLPRAMMAPLVGAALGVAGVMVQTLSRNRIASPDTLGLNAGASLAVVAASVGLG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCC
ISSLAVLSLVAAAGAFLTSILVFALAATAGGLSPLRIVLVGVTFAALMNAMVEVILTVNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
AELQQLLFWLSGAFVDRPLSLVARNIPLLALGGVMAAMLARPLDALQTDDATAQSLGAPI
HHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCH
RVIRIASFVAVALLTGASVAMAGPVGFVGLVVPHAARALVGARHGEKLVAAALIGAVYTT
HHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AADILARFVIYPTEAPVGAITAVVGAGLLLVLLRRRAA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRSAHIVLTAAESRLPLIYAGLALLLAFAVLGSLMLGYTIYMPGELWNALASSGTSEAD
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHCCCCCHHH
TVIREYRLPRAMMAPLVGAALGVAGVMVQTLSRNRIASPDTLGLNAGASLAVVAASVGLG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCC
ISSLAVLSLVAAAGAFLTSILVFALAATAGGLSPLRIVLVGVTFAALMNAMVEVILTVNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
AELQQLLFWLSGAFVDRPLSLVARNIPLLALGGVMAAMLARPLDALQTDDATAQSLGAPI
HHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCH
RVIRIASFVAVALLTGASVAMAGPVGFVGLVVPHAARALVGARHGEKLVAAALIGAVYTT
HHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AADILARFVIYPTEAPVGAITAVVGAGLLLVLLRRRAA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]