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The map label for this gene is rimP

Identifier: 109947687

GI number: 109947687

Start: 1003980

End: 1004420

Strand: Reverse

Name: rimP

Synonym: Hac_1157

Alternate gene names: 109947687

Gene position: 1004420-1003980 (Counterclockwise)

Preceding gene: 109947688

Following gene: 109947685

Centisome position: 64.64

GC content: 36.05

Gene sequence:

>441_bases
ATGACTAAAAGAATAGAAGAACGAATAGAAGGCGTGATTGAAAGCTTGGGTTATTTGCTTTATGATGTGAGTTTGATTAA
AGAAAGTGAGCAACATATTTTAAGGGTGAGTCTTAAAAACCCTAATGGGGCGGTTAGCTTGGATAATTGCCAACAGGTGA
GCGAAATTATTTCGCCCCTATTGGATGTGTGTGATTTTCTTAAAGACGCTTATATTTTAGAAGTGAGTTCCATGGGTTTA
GAAAGAACGCTTAAAACCCCCAAACATTTCAAGCTTTCTTTAGGCGAAAAAGTGGCAGTTAAGCTTATGAATAAACAAAG
CTTTCAAGCTATCCTTAAAGACGCTAACGATTTAAGCGTGGATTTTGAATTAGAGAATCACACTATCAAAAGCGTGGAGT
ATAAGGATTTAAAAAAGGTTAAAACGCTTTTTGAGTGGTGA

Upstream 100 bases:

>100_bases
TGGTTTAAATGCCCAAAACTCAGTTTTATTTTAGACAATAGTTTAGAAAAGCAGCTCCGCCTAGACGCTATATTTAATGA
GATCGCTAAAGGAAAAGATG

Downstream 100 bases:

>100_bases
AATAACATACCAAAAACATACATAACATGCTTTTGGTTTATAACGGTGTTTTTCACTCTTCCATTTGAGCGATATTTATG
ATTTCTTTGACCACATTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTKRIEERIEGVIESLGYLLYDVSLIKESEQHILRVSLKNPNGAVSLDNCQQVSEIISPLLDVCDFLKDAYILEVSSMGL
ERTLKTPKHFKLSLGEKVAVKLMNKQSFQAILKDANDLSVDFELENHTIKSVEYKDLKKVKTLFEW

Sequences:

>Translated_146_residues
MTKRIEERIEGVIESLGYLLYDVSLIKESEQHILRVSLKNPNGAVSLDNCQQVSEIISPLLDVCDFLKDAYILEVSSMGL
ERTLKTPKHFKLSLGEKVAVKLMNKQSFQAILKDANDLSVDFELENHTIKSVEYKDLKKVKTLFEW
>Mature_145_residues
TKRIEERIEGVIESLGYLLYDVSLIKESEQHILRVSLKNPNGAVSLDNCQQVSEIISPLLDVCDFLKDAYILEVSSMGLE
RTLKTPKHFKLSLGEKVAVKLMNKQSFQAILKDANDLSVDFELENHTIKSVEYKDLKKVKTLFEW

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=135, Percent_Identity=31.8518518518519, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_HELAH (Q17WR0)

Other databases:

- EMBL:   AM260522
- RefSeq:   YP_664915.1
- ProteinModelPortal:   Q17WR0
- SMR:   Q17WR0
- STRING:   Q17WR0
- GeneID:   4176974
- GenomeReviews:   AM260522_GR
- KEGG:   hac:Hac_1157
- NMPDR:   fig|382638.8.peg.1124
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   ESEQHIL
- PhylomeDB:   Q17WR0
- ProtClustDB:   CLSK496030
- BioCyc:   HACI382638:HAC_1157-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16716; Mature: 16584

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRIEERIEGVIESLGYLLYDVSLIKESEQHILRVSLKNPNGAVSLDNCQQVSEIISPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHHHHHHHHHHHH
LDVCDFLKDAYILEVSSMGLERTLKTPKHFKLSLGEKVAVKLMNKQSFQAILKDANDLSV
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCEE
DFELENHTIKSVEYKDLKKVKTLFEW
EEEECCCEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKRIEERIEGVIESLGYLLYDVSLIKESEQHILRVSLKNPNGAVSLDNCQQVSEIISPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHHHHHHHHHHHH
LDVCDFLKDAYILEVSSMGLERTLKTPKHFKLSLGEKVAVKLMNKQSFQAILKDANDLSV
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCEE
DFELENHTIKSVEYKDLKKVKTLFEW
EEEECCCEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA