| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947685
Identifier: 109947685
GI number: 109947685
Start: 1000620
End: 1001732
Strand: Reverse
Name: 109947685
Synonym: Hac_1155
Alternate gene names: NA
Gene position: 1001732-1000620 (Counterclockwise)
Preceding gene: 109947687
Following gene: 109947684
Centisome position: 64.46
GC content: 35.67
Gene sequence:
>1113_bases ATGCTGATTTCCATAGCGTTTTTATTGGTTTTGTGTCTTTTGAATTATAGTTCTTTTAGGATGTTAGAATCGTTTTTAAC CTTAAAAAAAGTTTCCCAACACGCTTATTTAGGGTTTTTCATCCTTTTAAGCATAGGCGAGACACTTTTTACTTTTTATA GAAACACCATGCCTAGCTATCTATTTTTTTTGACTTCAGCGTGTTCGTTTGTCACTTTTATTATTTTTATCCTTTCTTTA GGTTTTTATGGGTTTTCTTATTCTATAGAAAAAATAGATTTCTTGCATTCAAGGCGTAAAAGTTTAAAAAATTTTTTAAC ATTAGGGTTTTATCTGGCGTTGTTGGGGTATTTTTGGCGTGGGTTTTACGAAGGGTTGGCTCGCCCTAAAATCAAAGAAA CCCCTATTTATTTAGACAAATTAGACAAAGAGTTAAAGATTATTTTACTCACAGACATGCATGTGGGGAGTTTGTTGCAA AAAGATTTTGTCAACTACATTGTAGAAGAAGTCAATCAAAAAGAAGTGGATATGGTGTTGATTGGTGGGGATTTGGTGGA TGAAAACATTGAAAAAGTCAAATCTTTTTTACTGCCTTTAAACAACCTTAAAAGTACCCATGGCACTTTTTATGTGCCAG GAAATCATGAGTATTATCACGGCATAGAGCCGATTTTATCGTTTCTTGAAACTCTCAATTTGAAGATTTTAGGGAATGAG TGCGTGGATTTAGAGGGGGTTAATTTGTGTGGCGTGTATGATTATTTCGCAAGAAAGCATCAAAATTTTGCCCCTGATAT TGATAAAGCCTTACAAAAGTGCAATAAGAGTAAGCCTACGATCCTTTTAGCCCATCAGCCTAAACAAATTAGAAGTCTTA AAGAAAGCCACTCTGTGGATTTAGTGCTTTCAGGGCATACCCATGCAGGGCAAATTTTCCCCTTTAGCCTTTTAGTTAAG TTGGTGCAAACTTATTTGTATGGTTTATACAAGCACAGCGACACCACTCAAATTTATGTGAGCAGTGGGGCAGGGTATTG GGGTATTCCTTTAAGGTTTTTAGCCCCTAGCGAGATCGCATACCTTAGGCTTCTACCTAAAAATCAAGTTTAG
Upstream 100 bases:
>100_bases AGACTGATAAAAAATGAAACAATCGCAAGGATTGATCCTAAAGGGCACATTAGCGTTAATATGCTAACATAACAGAACAC TTTATAACTAAAAGGGTGAC
Downstream 100 bases:
>100_bases TTAAAAAATTTTTCAATATCTTAAAAATAGCGAGTTGTGAATCGAATCGCAATGGAGCACTTAAAAATAAGGGTTAAAAA ACAACCGCCAAGACAAAGAG
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MLISIAFLLVLCLLNYSSFRMLESFLTLKKVSQHAYLGFFILLSIGETLFTFYRNTMPSYLFFLTSACSFVTFIIFILSL GFYGFSYSIEKIDFLHSRRKSLKNFLTLGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQ KDFVNYIVEEVNQKEVDMVLIGGDLVDENIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLETLNLKILGNE CVDLEGVNLCGVYDYFARKHQNFAPDIDKALQKCNKSKPTILLAHQPKQIRSLKESHSVDLVLSGHTHAGQIFPFSLLVK LVQTYLYGLYKHSDTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQV
Sequences:
>Translated_370_residues MLISIAFLLVLCLLNYSSFRMLESFLTLKKVSQHAYLGFFILLSIGETLFTFYRNTMPSYLFFLTSACSFVTFIIFILSL GFYGFSYSIEKIDFLHSRRKSLKNFLTLGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQ KDFVNYIVEEVNQKEVDMVLIGGDLVDENIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLETLNLKILGNE CVDLEGVNLCGVYDYFARKHQNFAPDIDKALQKCNKSKPTILLAHQPKQIRSLKESHSVDLVLSGHTHAGQIFPFSLLVK LVQTYLYGLYKHSDTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQV >Mature_370_residues MLISIAFLLVLCLLNYSSFRMLESFLTLKKVSQHAYLGFFILLSIGETLFTFYRNTMPSYLFFLTSACSFVTFIIFILSL GFYGFSYSIEKIDFLHSRRKSLKNFLTLGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQ KDFVNYIVEEVNQKEVDMVLIGGDLVDENIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLETLNLKILGNE CVDLEGVNLCGVYDYFARKHQNFAPDIDKALQKCNKSKPTILLAHQPKQIRSLKESHSVDLVLSGHTHAGQIFPFSLLVK LVQTYLYGLYKHSDTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQV
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031196, Length=270, Percent_Identity=35.5555555555556, Blast_Score=151, Evalue=7e-37, Organism=Homo sapiens, GI210031210, Length=294, Percent_Identity=34.3537414965986, Blast_Score=148, Evalue=8e-36, Organism=Caenorhabditis elegans, GI71996034, Length=371, Percent_Identity=29.6495956873315, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI115535028, Length=274, Percent_Identity=33.9416058394161, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI115535030, Length=274, Percent_Identity=33.9416058394161, Blast_Score=145, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 42452; Mature: 42452
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISIAFLLVLCLLNYSSFRMLESFLTLKKVSQHAYLGFFILLSIGETLFTFYRNTMPSY CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFLTSACSFVTFIIFILSLGFYGFSYSIEKIDFLHSRRKSLKNFLTLGFYLALLGYFWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQKDFVNYIVEEVNQKEVDMVL HHHHHHCCCCCCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEE IGGDLVDENIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLETLNLKILGNE ECCCHHHHHHHHHHHHHHCHHHCCCCCCEEEECCCCCHHCCHHHHHHHHHHCCEEEECCC CVDLEGVNLCGVYDYFARKHQNFAPDIDKALQKCNKSKPTILLAHQPKQIRSLKESHSVD CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEE LVLSGHTHAGQIFPFSLLVKLVQTYLYGLYKHSDTTQIYVSSGAGYWGIPLRFLAPSEIA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCEEEECCCCEE YLRLLPKNQV EEEECCCCCC >Mature Secondary Structure MLISIAFLLVLCLLNYSSFRMLESFLTLKKVSQHAYLGFFILLSIGETLFTFYRNTMPSY CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFLTSACSFVTFIIFILSLGFYGFSYSIEKIDFLHSRRKSLKNFLTLGFYLALLGYFWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQKDFVNYIVEEVNQKEVDMVL HHHHHHCCCCCCCCCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEE IGGDLVDENIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLETLNLKILGNE ECCCHHHHHHHHHHHHHHCHHHCCCCCCEEEECCCCCHHCCHHHHHHHHHHCCEEEECCC CVDLEGVNLCGVYDYFARKHQNFAPDIDKALQKCNKSKPTILLAHQPKQIRSLKESHSVD CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEE LVLSGHTHAGQIFPFSLLVKLVQTYLYGLYKHSDTTQIYVSSGAGYWGIPLRFLAPSEIA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCEEEECCCCEE YLRLLPKNQV EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]