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The map label for this gene is addB

Identifier: 109947126

GI number: 109947126

Start: 458113

End: 459408

Strand: Direct

Name: addB

Synonym: Hac_0533

Alternate gene names: NA

Gene position: 458113-459408 (Clockwise)

Preceding gene: 109947125

Following gene: 109947127

Centisome position: 29.48

GC content: 37.58

Gene sequence:

>1296_bases
ATGGATATTCCAATAAAAAAAAGATTTTTAGCGAGTTTGTTGCTTTTTAGCTTGCTTTCTTGCCTCAAGGCTGAACCCCT
TTCAGAAGATCATCAAATTCTATTGAGTTCAGACGCTTTCCATAGGGGGGATTTTGCAGCGGCTCAAAAGGGGTATATGA
GTCTTTACAAGCAAACTAATAAGGTGGTTTATGCTAAAGAGGCAGCCATTTCAGCGGCGAGTTTAGGGGACATTAAAACC
GCGATGCATTTAGCCATGCTCTATCAAAAAATCACCAATAATCGTAACGATCTCTCTATCAATAAGATTTTAGTGGATGG
TTATGCACAAATGGGGCAAATTGATAAGGCGATCGCGTTGTTGCAAAAAATCCGTAAAGAAGAAAAAACCATAGGCACAG
ACAATGTGTTAGGGACTTTGTATTTGTCTCAAAAGCGTTTGGATAAGGCTTTCCCCTTATTGAATAAGTTTTATAATGCA
GTGCATGATGAAGACAGCCTTGAAAAAATTATTACGATTTACTTTTTGCAAAATCGTAAAAAAGAGGGCCTGGATTTGTT
GCAATCCCACATAGACAGGTATGGTTGCTCAGAGCAATTATGCCAAAAAGCGCTCAGCACTTTCACGCAATTTAATGAGT
TAAATTTGGCTAAAACCACTTTCGCTCGCCTATATGAAAAAAACCCAGTCGTGCAAAACGCCCAACTTTATATTGGGGTG
CTGATTTTATTGAAAGAATTTGATAAAGCCCAACAGATCGCAGAATTGTTTCCCTTTGACAGGCGCTTGTTACTGGATTT
ATACACTGCACAAAAGAAATTTGATCAAGCTTCCAAACAAGCCTCTTTGATCTATCAAGAAAAAAAAGATCCTAAATTTT
TAGGGCTAGAGGCGATTTATCATTATGAAAGTTTGAGCATGAAAAATAAAAAACTCACCAAACAAGAGATGCTGCCTATC
ATCCAAAAATTAGAAAAAGCTACCAAAGAGCGCCAAGTATGGCTTGCTAAAACCAAAGACAAAGAAGACGCACAAGACGC
TTTCTTTTATAATTTTTTAGGGTATTCTTTAATAGATTATGGCATGGATGTTAAAAGGGGCATGGATTTGGTTAAAAAAG
CTTTAGCCCTAGACGCTAGCTCTGCACTTTATTTGGACTCTTTGGCATGGGGTTATTACAAGTTGGGGAATTGCTTGGAG
GCTAAAAAAATCTTTTCTACCATCGCTAAAGATCTTATCCAAGCTGAACCTGAATTAAAAGAGCATCATAAAATCATCCA
AGAATGCAAGAAGTAG

Upstream 100 bases:

>100_bases
GGAAGCTTTTTGCAAAAGTTGTTTGGGCATCACACAAAAAACTAAAGAGACTAAAGTGCGCTAAAATGTGTTTTTAGTGA
CACAAAAAGGAAATAAAGTC

Downstream 100 bases:

>100_bases
GGATTTTAGAGAATTTGCAAAAAAGCCTAGCCTTAAAAGAGGGCATGCTCTCTTATGAAATGTTAGGTAAAAGTTTGTCG
TATAACCCTTACTTGCCTAG

Product: ATP-dependent nuclease

Products: NA

Alternate protein names: ATP Dependent Nuclease AddB; ATP-Dependent Nuclease; Tetratricopeptide Repeat Domain Protein; Tpr Repeat-Containing Protein; Lipoprotein

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDIPIKKRFLASLLLFSLLSCLKAEPLSEDHQILLSSDAFHRGDFAAAQKGYMSLYKQTNKVVYAKEAAISAASLGDIKT
AMHLAMLYQKITNNRNDLSINKILVDGYAQMGQIDKAIALLQKIRKEEKTIGTDNVLGTLYLSQKRLDKAFPLLNKFYNA
VHDEDSLEKIITIYFLQNRKKEGLDLLQSHIDRYGCSEQLCQKALSTFTQFNELNLAKTTFARLYEKNPVVQNAQLYIGV
LILLKEFDKAQQIAELFPFDRRLLLDLYTAQKKFDQASKQASLIYQEKKDPKFLGLEAIYHYESLSMKNKKLTKQEMLPI
IQKLEKATKERQVWLAKTKDKEDAQDAFFYNFLGYSLIDYGMDVKRGMDLVKKALALDASSALYLDSLAWGYYKLGNCLE
AKKIFSTIAKDLIQAEPELKEHHKIIQECKK

Sequences:

>Translated_431_residues
MDIPIKKRFLASLLLFSLLSCLKAEPLSEDHQILLSSDAFHRGDFAAAQKGYMSLYKQTNKVVYAKEAAISAASLGDIKT
AMHLAMLYQKITNNRNDLSINKILVDGYAQMGQIDKAIALLQKIRKEEKTIGTDNVLGTLYLSQKRLDKAFPLLNKFYNA
VHDEDSLEKIITIYFLQNRKKEGLDLLQSHIDRYGCSEQLCQKALSTFTQFNELNLAKTTFARLYEKNPVVQNAQLYIGV
LILLKEFDKAQQIAELFPFDRRLLLDLYTAQKKFDQASKQASLIYQEKKDPKFLGLEAIYHYESLSMKNKKLTKQEMLPI
IQKLEKATKERQVWLAKTKDKEDAQDAFFYNFLGYSLIDYGMDVKRGMDLVKKALALDASSALYLDSLAWGYYKLGNCLE
AKKIFSTIAKDLIQAEPELKEHHKIIQECKK
>Mature_431_residues
MDIPIKKRFLASLLLFSLLSCLKAEPLSEDHQILLSSDAFHRGDFAAAQKGYMSLYKQTNKVVYAKEAAISAASLGDIKT
AMHLAMLYQKITNNRNDLSINKILVDGYAQMGQIDKAIALLQKIRKEEKTIGTDNVLGTLYLSQKRLDKAFPLLNKFYNA
VHDEDSLEKIITIYFLQNRKKEGLDLLQSHIDRYGCSEQLCQKALSTFTQFNELNLAKTTFARLYEKNPVVQNAQLYIGV
LILLKEFDKAQQIAELFPFDRRLLLDLYTAQKKFDQASKQASLIYQEKKDPKFLGLEAIYHYESLSMKNKKLTKQEMLPI
IQKLEKATKERQVWLAKTKDKEDAQDAFFYNFLGYSLIDYGMDVKRGMDLVKKALALDASSALYLDSLAWGYYKLGNCLE
AKKIFSTIAKDLIQAEPELKEHHKIIQECKK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49424; Mature: 49424

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIPIKKRFLASLLLFSLLSCLKAEPLSEDHQILLSSDAFHRGDFAAAQKGYMSLYKQTN
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC
KVVYAKEAAISAASLGDIKTAMHLAMLYQKITNNRNDLSINKILVDGYAQMGQIDKAIAL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LQKIRKEEKTIGTDNVLGTLYLSQKRLDKAFPLLNKFYNAVHDEDSLEKIITIYFLQNRK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
KEGLDLLQSHIDRYGCSEQLCQKALSTFTQFNELNLAKTTFARLYEKNPVVQNAQLYIGV
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LILLKEFDKAQQIAELFPFDRRLLLDLYTAQKKFDQASKQASLIYQEKKDPKFLGLEAIY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HYESLSMKNKKLTKQEMLPIIQKLEKATKERQVWLAKTKDKEDAQDAFFYNFLGYSLIDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GMDVKRGMDLVKKALALDASSALYLDSLAWGYYKLGNCLEAKKIFSTIAKDLIQAEPELK
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EHHKIIQECKK
HHHHHHHHHCC
>Mature Secondary Structure
MDIPIKKRFLASLLLFSLLSCLKAEPLSEDHQILLSSDAFHRGDFAAAQKGYMSLYKQTN
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC
KVVYAKEAAISAASLGDIKTAMHLAMLYQKITNNRNDLSINKILVDGYAQMGQIDKAIAL
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LQKIRKEEKTIGTDNVLGTLYLSQKRLDKAFPLLNKFYNAVHDEDSLEKIITIYFLQNRK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
KEGLDLLQSHIDRYGCSEQLCQKALSTFTQFNELNLAKTTFARLYEKNPVVQNAQLYIGV
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LILLKEFDKAQQIAELFPFDRRLLLDLYTAQKKFDQASKQASLIYQEKKDPKFLGLEAIY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HYESLSMKNKKLTKQEMLPIIQKLEKATKERQVWLAKTKDKEDAQDAFFYNFLGYSLIDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GMDVKRGMDLVKKALALDASSALYLDSLAWGYYKLGNCLEAKKIFSTIAKDLIQAEPELK
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EHHKIIQECKK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA