Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947125
Identifier: 109947125
GI number: 109947125
Start: 457678
End: 458076
Strand: Direct
Name: 109947125
Synonym: Hac_0532
Alternate gene names: NA
Gene position: 457678-458076 (Clockwise)
Preceding gene: 109947124
Following gene: 109947126
Centisome position: 29.45
GC content: 37.09
Gene sequence:
>399_bases ATGGGTGGTTTTGATTTTAATTTTGACAATAAAGCATGCGAGAATTGTGGGGCAAAGTGTTGCGTGGGGGAAAGCGGGTA TATTTTTGTAACGATCCAAGAAATGCAAACAATTAGCGCTTTTTTAAAATTGGAATTGGAAGAATTTAGCCAAAAATATG TTAAAAAGGTAGGGTATAAGTTCTCTTTATTAGAAAAAGACGCTAAAGATTTGGGTTTGGCGTGCGTGTTTTTGGATTTA GAGACGAAAAAATGCCAGATTTATAGCGCACGCCCCAAACAATGCCAAACCTTTCCTTTTTGGGAGAGCGTGAAAAGCTT TTCTAAAGAGCAAAAGGAAGCTTTTTGCAAAAGTTGTTTGGGCATCACACAAAAAACTAAAGAGACTAAAGTGCGCTAA
Upstream 100 bases:
>100_bases TACCCAGCGCTCAAAGCCAATTACCCTTAAAGATTTCTAAAGATAATGATGGGTTGTTGGTGCAATTTAGCGTGAATATT GGTTTGCAATAAGGCGATTT
Downstream 100 bases:
>100_bases AATGTGTTTTTAGTGACACAAAAAGGAAATAAAGTCATGGATATTCCAATAAAAAAAAGATTTTTAGCGAGTTTGTTGCT TTTTAGCTTGCTTTCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MGGFDFNFDNKACENCGAKCCVGESGYIFVTIQEMQTISAFLKLELEEFSQKYVKKVGYKFSLLEKDAKDLGLACVFLDL ETKKCQIYSARPKQCQTFPFWESVKSFSKEQKEAFCKSCLGITQKTKETKVR
Sequences:
>Translated_132_residues MGGFDFNFDNKACENCGAKCCVGESGYIFVTIQEMQTISAFLKLELEEFSQKYVKKVGYKFSLLEKDAKDLGLACVFLDL ETKKCQIYSARPKQCQTFPFWESVKSFSKEQKEAFCKSCLGITQKTKETKVR >Mature_131_residues GGFDFNFDNKACENCGAKCCVGESGYIFVTIQEMQTISAFLKLELEEFSQKYVKKVGYKFSLLEKDAKDLGLACVFLDLE TKKCQIYSARPKQCQTFPFWESVKSFSKEQKEAFCKSCLGITQKTKETKVR
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0661 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 15085; Mature: 14953
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGFDFNFDNKACENCGAKCCVGESGYIFVTIQEMQTISAFLKLELEEFSQKYVKKVGYK CCCCCCCCCCHHHHHCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSLLEKDAKDLGLACVFLDLETKKCQIYSARPKQCQTFPFWESVKSFSKEQKEAFCKSCL HHHHHHCHHHCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GITQKTKETKVR CCCCCCCCCCCC >Mature Secondary Structure GGFDFNFDNKACENCGAKCCVGESGYIFVTIQEMQTISAFLKLELEEFSQKYVKKVGYK CCCCCCCCCHHHHHCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSLLEKDAKDLGLACVFLDLETKKCQIYSARPKQCQTFPFWESVKSFSKEQKEAFCKSCL HHHHHHCHHHCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GITQKTKETKVR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]