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The map label for this gene is trpC [H]

Identifier: 109947127

GI number: 109947127

Start: 459396

End: 459953

Strand: Direct

Name: trpC [H]

Synonym: Hac_0534

Alternate gene names: 109947127

Gene position: 459396-459953 (Clockwise)

Preceding gene: 109947126

Following gene: 109947128

Centisome position: 29.56

GC content: 37.1

Gene sequence:

>558_bases
ATGCAAGAAGTAGGGATTTTAGAGAATTTGCAAAAAAGCCTAGCCTTAAAAGAGGGCATGCTCTCTTATGAAATGTTAGG
TAAAAGTTTGTCGTATAACCCTTACTTGCCTAGAGTCATTTCTAAAACTAAAAACTATGTTTTTGTAACTCCTAGCGAGG
TTTTAGAAAAACTTTTACAAGAAAACACCCATACAGATTGCGTGATCATCAATTTCAAAGGTTTGTATGAATTAGGCGTG
CCAAGCGTGTTTGACTTGGAAGTTTTAGGGTTGTTGCGCCGCCATGCAAGCTCTATGATTGTCCAACAGGATTTTTTCAT
TAGCCATTACCAGCTTTTAGAATCGCTCGTTCAAGGCACTGATGGAGTCATTTTAGATGAAGGGCTTTTAAAAGAGGATT
TAAAGGGCATGATAGATTTTGCTTGCCGTTTGGGCTTAAGCGTGTTTGTGGAAACTGACAAGCCAAATCATGCTTATTTG
AAAGGTTTAGGGGTTTTAGGCGTGTTGGAAAAAATCTCTCATTCTCAAAATCAAAAAAAAATAGTCTTTTTAGATTGA

Upstream 100 bases:

>100_bases
TGGGGAATTGCTTGGAGGCTAAAAAAATCTTTTCTACCATCGCTAAAGATCTTATCCAAGCTGAACCTGAATTAAAAGAG
CATCATAAAATCATCCAAGA

Downstream 100 bases:

>100_bases
ATTTTAAGCTAATTTTGAGTAAAAATCGCATTTAAACTTTTTAAAAGGAGTTATCATGTCATTATTGGTGAATGATGAAT
GCATTGCATGCGATGCTTGC

Product: indole-3-glycerol phosphate synthase

Products: NA

Alternate protein names: IGPS [H]

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MQEVGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVISKTKNYVFVTPSEVLEKLLQENTHTDCVIINFKGLYELGV
PSVFDLEVLGLLRRHASSMIVQQDFFISHYQLLESLVQGTDGVILDEGLLKEDLKGMIDFACRLGLSVFVETDKPNHAYL
KGLGVLGVLEKISHSQNQKKIVFLD

Sequences:

>Translated_185_residues
MQEVGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVISKTKNYVFVTPSEVLEKLLQENTHTDCVIINFKGLYELGV
PSVFDLEVLGLLRRHASSMIVQQDFFISHYQLLESLVQGTDGVILDEGLLKEDLKGMIDFACRLGLSVFVETDKPNHAYL
KGLGVLGVLEKISHSQNQKKIVFLD
>Mature_185_residues
MQEVGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVISKTKNYVFVTPSEVLEKLLQENTHTDCVIINFKGLYELGV
PSVFDLEVLGLLRRHASSMIVQQDFFISHYQLLESLVQGTDGVILDEGLLKEDLKGMIDFACRLGLSVFVETDKPNHAYL
KGLGVLGVLEKISHSQNQKKIVFLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR013798
- InterPro:   IPR001468
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00218 IGPS [H]

EC number: =4.1.1.48 [H]

Molecular weight: Translated: 20820; Mature: 20820

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEVGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVISKTKNYVFVTPSEVLEKLLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECHHHHHHHHHH
ENTHTDCVIINFKGLYELGVPSVFDLEVLGLLRRHASSMIVQQDFFISHYQLLESLVQGT
CCCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGVILDEGLLKEDLKGMIDFACRLGLSVFVETDKPNHAYLKGLGVLGVLEKISHSQNQKK
CCEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCE
IVFLD
EEEEC
>Mature Secondary Structure
MQEVGILENLQKSLALKEGMLSYEMLGKSLSYNPYLPRVISKTKNYVFVTPSEVLEKLLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECHHHHHHHHHH
ENTHTDCVIINFKGLYELGVPSVFDLEVLGLLRRHASSMIVQQDFFISHYQLLESLVQGT
CCCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DGVILDEGLLKEDLKGMIDFACRLGLSVFVETDKPNHAYLKGLGVLGVLEKISHSQNQKK
CCEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCE
IVFLD
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA