Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947095
Identifier: 109947095
GI number: 109947095
Start: 438530
End: 438949
Strand: Direct
Name: 109947095
Synonym: Hac_0498
Alternate gene names: NA
Gene position: 438530-438949 (Clockwise)
Preceding gene: 109947094
Following gene: 109947096
Centisome position: 28.22
GC content: 36.43
Gene sequence:
>420_bases ATGAAGCAAATGATTAAAAAAGTTCTTAAAGGTTTATTACCCACTAGGGTTTTAAACGCATATTGTCATGTTGAAAACTT GGGAGCGATTAAAGATCAAGTTACTTTGATAGCCAATCAAGTCAATTCTATTCTTTGGCGAGCAGAAAGGGTCATGACCA TCAATGAATTGTTTATTGAAACCCCTAAAGAAAAGATAGAAAGTTTTATTAAAAGCTTACACCCCATTAAGACAGAGCAT GAGTTAGTGCGTTTAGGGGCAAAACATGATGGAGGTTATTTGGTGCCTAAGGATTTTAAGGGGATTAAAGCGCTCTTTTC TCCAGGTGTGGGTCACACAAGTGCGTTTGAAGAAGATTTTTATCGTCAATGCAGGCTTGCAAACTCTAATGATATATATA TATGGCAGACAAATCGGTAA
Upstream 100 bases:
>100_bases TTTCCATATTGAAATGCTTGAAAATGCACATTTCAGGCAAGCAAAAATCCACACGAAGTATTTAGAAGAAAATTTTTAAA CTTAATTGCAAGGAGATTTA
Downstream 100 bases:
>100_bases ATGAACCGATATTAAATATCCCTAAAGAAAACTACTCCTTTATTAAAAAATTCATTGGTTGTTCTAATGATGAAGATTTT ATTACTCTAGACACTTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKQMIKKVLKGLLPTRVLNAYCHVENLGAIKDQVTLIANQVNSILWRAERVMTINELFIETPKEKIESFIKSLHPIKTEH ELVRLGAKHDGGYLVPKDFKGIKALFSPGVGHTSAFEEDFYRQCRLANSNDIYIWQTNR
Sequences:
>Translated_139_residues MKQMIKKVLKGLLPTRVLNAYCHVENLGAIKDQVTLIANQVNSILWRAERVMTINELFIETPKEKIESFIKSLHPIKTEH ELVRLGAKHDGGYLVPKDFKGIKALFSPGVGHTSAFEEDFYRQCRLANSNDIYIWQTNR >Mature_139_residues MKQMIKKVLKGLLPTRVLNAYCHVENLGAIKDQVTLIANQVNSILWRAERVMTINELFIETPKEKIESFIKSLHPIKTEH ELVRLGAKHDGGYLVPKDFKGIKALFSPGVGHTSAFEEDFYRQCRLANSNDIYIWQTNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15967; Mature: 15967
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQMIKKVLKGLLPTRVLNAYCHVENLGAIKDQVTLIANQVNSILWRAERVMTINELFIE CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPKEKIESFIKSLHPIKTEHELVRLGAKHDGGYLVPKDFKGIKALFSPGVGHTSAFEEDF CCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEECCCCHHHHHHHHCCCCCCCHHHHHHH YRQCRLANSNDIYIWQTNR HHHHCCCCCCCEEEEECCC >Mature Secondary Structure MKQMIKKVLKGLLPTRVLNAYCHVENLGAIKDQVTLIANQVNSILWRAERVMTINELFIE CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPKEKIESFIKSLHPIKTEHELVRLGAKHDGGYLVPKDFKGIKALFSPGVGHTSAFEEDF CCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEECCCCHHHHHHHHCCCCCCCHHHHHHH YRQCRLANSNDIYIWQTNR HHHHCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA