Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109947096

Identifier: 109947096

GI number: 109947096

Start: 438931

End: 439464

Strand: Direct

Name: 109947096

Synonym: Hac_0499

Alternate gene names: NA

Gene position: 438931-439464 (Clockwise)

Preceding gene: 109947095

Following gene: 109947097

Centisome position: 28.25

GC content: 34.08

Gene sequence:

>534_bases
ATGGCAGACAAATCGGTAAATGAACCGATATTAAATATCCCTAAAGAAAACTACTCCTTTATTAAAAAATTCATTGGTTG
TTCTAATGATGAAGATTTTATTACTCTAGACACTTGGGTGGATAATTCTCAAGTGGGCGAAGGGGATTTGGTGTTGCAAA
TGGATATTGAGGGGGGCGAGTATCTTTCCCTTATCAATGCGAGTGATGGATTATTGAATCGTTTTAGAATTATTGCTTTA
GAAATCCATTGGTTAAAATATTTATGGGATAAAAGCTATTTTGAAATGGTTCAAAGCACTTTAAATAAAATTTTAAAAAC
GCATTATTGCGTGCATTTGCACCCTTGTAATTACGAAAGTGTTTTTACCTATAAAGATTTGGATATCGTTGAAGTGCTAG
AATGCACTTTTATTAGAAAGGATAGGGTAAAAAATATTTTGGGCTATTGCACTGATTTTCCGCACCCATTAGACACGGAT
GATGCGGTTGAAAATCCTACACTAGTTTTACCTAGAAATTGGTATGGAGGCTAA

Upstream 100 bases:

>100_bases
GGATTAAAGCGCTCTTTTCTCCAGGTGTGGGTCACACAAGTGCGTTTGAAGAAGATTTTTATCGTCAATGCAGGCTTGCA
AACTCTAATGATATATATAT

Downstream 100 bases:

>100_bases
AGCCTTTCCATATTGAAATGCTTGAAAATGCACATTTCAGGCAAGCAAACATCCACACGAAGTATTTGGTATTGTCTCTT
AAAGCTCAAACCAACCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MADKSVNEPILNIPKENYSFIKKFIGCSNDEDFITLDTWVDNSQVGEGDLVLQMDIEGGEYLSLINASDGLLNRFRIIAL
EIHWLKYLWDKSYFEMVQSTLNKILKTHYCVHLHPCNYESVFTYKDLDIVEVLECTFIRKDRVKNILGYCTDFPHPLDTD
DAVENPTLVLPRNWYGG

Sequences:

>Translated_177_residues
MADKSVNEPILNIPKENYSFIKKFIGCSNDEDFITLDTWVDNSQVGEGDLVLQMDIEGGEYLSLINASDGLLNRFRIIAL
EIHWLKYLWDKSYFEMVQSTLNKILKTHYCVHLHPCNYESVFTYKDLDIVEVLECTFIRKDRVKNILGYCTDFPHPLDTD
DAVENPTLVLPRNWYGG
>Mature_176_residues
ADKSVNEPILNIPKENYSFIKKFIGCSNDEDFITLDTWVDNSQVGEGDLVLQMDIEGGEYLSLINASDGLLNRFRIIALE
IHWLKYLWDKSYFEMVQSTLNKILKTHYCVHLHPCNYESVFTYKDLDIVEVLECTFIRKDRVKNILGYCTDFPHPLDTDD
AVENPTLVLPRNWYGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20548; Mature: 20416

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKSVNEPILNIPKENYSFIKKFIGCSNDEDFITLDTWVDNSQVGEGDLVLQMDIEGGE
CCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCC
YLSLINASDGLLNRFRIIALEIHWLKYLWDKSYFEMVQSTLNKILKTHYCVHLHPCNYES
EEEEEECCCCHHHHEEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEEECCCCCC
VFTYKDLDIVEVLECTFIRKDRVKNILGYCTDFPHPLDTDDAVENPTLVLPRNWYGG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
ADKSVNEPILNIPKENYSFIKKFIGCSNDEDFITLDTWVDNSQVGEGDLVLQMDIEGGE
CCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCC
YLSLINASDGLLNRFRIIALEIHWLKYLWDKSYFEMVQSTLNKILKTHYCVHLHPCNYES
EEEEEECCCCHHHHEEEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEEECCCCCC
VFTYKDLDIVEVLECTFIRKDRVKNILGYCTDFPHPLDTDDAVENPTLVLPRNWYGG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA