Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947070
Identifier: 109947070
GI number: 109947070
Start: 418498
End: 419004
Strand: Direct
Name: 109947070
Synonym: Hac_0471
Alternate gene names: NA
Gene position: 418498-419004 (Clockwise)
Preceding gene: 109947069
Following gene: 109947072
Centisome position: 26.93
GC content: 36.29
Gene sequence:
>507_bases ATGTTAGATAATATGGGAAAAAGCACGCGGTATGAGTTCCCTAAAATTAAAGAAATCCTAGAGCAAAGCGAAGAAGAATG GCTCAAAGTCGCCCATGAAGAATGCATAGCGTTAGTCATGTTAATAAGCCCCAAGGCTACTATTGAAAATAGTCCGATTT ATAAGAATTGCTATGAAGCTTATGTGAAGCAAAGAATCCATGATTTATATGATTTTTGTATAGAGGGCAAAAAGGTGAAA AGAAAAATCAAAAAAGCCCATAAGCATGAGGTTGCTCTCAATCAATCCCAGCCCTTAAAAGAACCACCTAAAAATGAGCA TCAAGAAAAACCTAGCTTAAAAGATGCGAGTATCCCTAAAGGGTATTATTTGCAAGTGGAGGCTTTTTTAAACACGCCCA GCAAGGATTTTTTACAAACGCTCAAAAATTTCCCTTACCAAATAGAGAAAAAAGACTCTCTCATGCATTATTTTTTGGCC CTTACAAAATCAAAGAAGAAGCCCTAA
Upstream 100 bases:
>100_bases CAAAAAGATAACCACCTAGCCTAAAAGCCCTCAAAATGCGCCTAAAAATTTACCCCCATCCAATCAAGGCTCAACCAAAC CCTATGAAGATCTTATCAAA
Downstream 100 bases:
>100_bases AACAGCTTGAAAATGCGGCTAAAAGCTTTAAAAATACCCATGTTGGTGGAAAAATGATTGTTTTAGTTTCAATTCTCAAT AGCTTTTTCTAATGGCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MLDNMGKSTRYEFPKIKEILEQSEEEWLKVAHEECIALVMLISPKATIENSPIYKNCYEAYVKQRIHDLYDFCIEGKKVK RKIKKAHKHEVALNQSQPLKEPPKNEHQEKPSLKDASIPKGYYLQVEAFLNTPSKDFLQTLKNFPYQIEKKDSLMHYFLA LTKSKKKP
Sequences:
>Translated_168_residues MLDNMGKSTRYEFPKIKEILEQSEEEWLKVAHEECIALVMLISPKATIENSPIYKNCYEAYVKQRIHDLYDFCIEGKKVK RKIKKAHKHEVALNQSQPLKEPPKNEHQEKPSLKDASIPKGYYLQVEAFLNTPSKDFLQTLKNFPYQIEKKDSLMHYFLA LTKSKKKP >Mature_168_residues MLDNMGKSTRYEFPKIKEILEQSEEEWLKVAHEECIALVMLISPKATIENSPIYKNCYEAYVKQRIHDLYDFCIEGKKVK RKIKKAHKHEVALNQSQPLKEPPKNEHQEKPSLKDASIPKGYYLQVEAFLNTPSKDFLQTLKNFPYQIEKKDSLMHYFLA LTKSKKKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19757; Mature: 19757
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDNMGKSTRYEFPKIKEILEQSEEEWLKVAHEECIALVMLISPKATIENSPIYKNCYEA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH YVKQRIHDLYDFCIEGKKVKRKIKKAHKHEVALNQSQPLKEPPKNEHQEKPSLKDASIPK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCC GYYLQVEAFLNTPSKDFLQTLKNFPYQIEKKDSLMHYFLALTKSKKKP CEEEEEHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLDNMGKSTRYEFPKIKEILEQSEEEWLKVAHEECIALVMLISPKATIENSPIYKNCYEA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH YVKQRIHDLYDFCIEGKKVKRKIKKAHKHEVALNQSQPLKEPPKNEHQEKPSLKDASIPK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCC GYYLQVEAFLNTPSKDFLQTLKNFPYQIEKKDSLMHYFLALTKSKKKP CEEEEEHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA