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The map label for this gene is hpaA

Identifier: 109947069

GI number: 109947069

Start: 416178

End: 416927

Strand: Direct

Name: hpaA

Synonym: Hac_0467

Alternate gene names: NA

Gene position: 416178-416927 (Clockwise)

Preceding gene: 109947068

Following gene: 109947070

Centisome position: 26.78

GC content: 36.93

Gene sequence:

>750_bases
ATGAAAAAAGGTAGTTTGGCGTTAGTTTTAGGATCGTTGTTAGTGAGTGGGGCGTTTTATACGGCTTTAGCTGAAGAAAT
GCCCACAAAGCACCAACATAATAATATGGGCGAGTCGGTAGAATTGCATTTTTACTATCCTATTAAAGGCAAGCAAGAAC
CTAAAAATAGCCATTTAGTCGTGTTGGTTGAACCTAACATAGAGGTTAATAAAGTTATCCCTGAAGATTATCAAAAAGAG
TTTGAAAAGTCTTTAGTCTTTCAGTTGAGCAGTTTGTTAGAAAAAAAGGGTTATAGCGTTTCGTCATTCAAAGATGTTAG
CGAGATCCCCCAAGACACAAAAGAAAAGGCGTTGCTCGTTTTACGCATGGATGGGAATATGGCGATTTTAGAAGATTTGG
TGGAAGAAAACGATGCAACGAGAGAAGAAAAAGTGATTGACATGTCTTCAGGGTATTTGAATTTGAATTTTGTTGAACCC
AAAAGTGAAGACATTATCCATAGTTTTGGCGTTGATATTTCAAAAATTAAAGCTGTGATTGAACGAGTGGTGTTGGATCG
CATGAATTCTGGAGGTTTTGTCCCTAAAACTTTTATACATAAGATTAAGGAAACCGATCATGACAGAGCCATTAAAAAGA
TCATGAATCAAGCTTACCACAAAGTTATGGCACAAGTTTCTAAAGAGTTGAATAAAAAGAACATGGGGCGTTATGAAAAA
ATGGCGAGCGAGATGAAAAACCGCAAGTAG

Upstream 100 bases:

>100_bases
AGGAACGATTGAATGGGAATGATTATCCGCAAAATTAGAGGTAAAAAGTGGGATTTTTTGGGTAAGATTAGAAACTGATT
TTAAAAAAGAAAGGAAGTTA

Downstream 100 bases:

>100_bases
TTTTAAGAAAAAGTTTAAAATCATTTAGAGCCGCTTTTAAATGGCGGCTTTTTTAAAAGCGTGGGGGAGTTGGATTAGGG
TATTTTTTGAGCGTTGTTTT

Product: neuraminyllactose-binding hemagglutinin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKKGSLALVLGSLLVSGAFYTALAEEMPTKHQHNNMGESVELHFYYPIKGKQEPKNSHLVVLVEPNIEVNKVIPEDYQKE
FEKSLVFQLSSLLEKKGYSVSSFKDVSEIPQDTKEKALLVLRMDGNMAILEDLVEENDATREEKVIDMSSGYLNLNFVEP
KSEDIIHSFGVDISKIKAVIERVVLDRMNSGGFVPKTFIHKIKETDHDRAIKKIMNQAYHKVMAQVSKELNKKNMGRYEK
MASEMKNRK

Sequences:

>Translated_249_residues
MKKGSLALVLGSLLVSGAFYTALAEEMPTKHQHNNMGESVELHFYYPIKGKQEPKNSHLVVLVEPNIEVNKVIPEDYQKE
FEKSLVFQLSSLLEKKGYSVSSFKDVSEIPQDTKEKALLVLRMDGNMAILEDLVEENDATREEKVIDMSSGYLNLNFVEP
KSEDIIHSFGVDISKIKAVIERVVLDRMNSGGFVPKTFIHKIKETDHDRAIKKIMNQAYHKVMAQVSKELNKKNMGRYEK
MASEMKNRK
>Mature_249_residues
MKKGSLALVLGSLLVSGAFYTALAEEMPTKHQHNNMGESVELHFYYPIKGKQEPKNSHLVVLVEPNIEVNKVIPEDYQKE
FEKSLVFQLSSLLEKKGYSVSSFKDVSEIPQDTKEKALLVLRMDGNMAILEDLVEENDATREEKVIDMSSGYLNLNFVEP
KSEDIIHSFGVDISKIKAVIERVVLDRMNSGGFVPKTFIHKIKETDHDRAIKKIMNQAYHKVMAQVSKELNKKNMGRYEK
MASEMKNRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28392; Mature: 28392

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGSLALVLGSLLVSGAFYTALAEEMPTKHQHNNMGESVELHFYYPIKGKQEPKNSHLV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEEEECCCCCCCCCCCCEE
VLVEPNIEVNKVIPEDYQKEFEKSLVFQLSSLLEKKGYSVSSFKDVSEIPQDTKEKALLV
EEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHEEEE
LRMDGNMAILEDLVEENDATREEKVIDMSSGYLNLNFVEPKSEDIIHSFGVDISKIKAVI
EEECCCHHHHHHHHHCCCCCHHHHHEECCCCEEEEEEECCCCHHHHHHHCCCHHHHHHHH
ERVVLDRMNSGGFVPKTFIHKIKETDHDRAIKKIMNQAYHKVMAQVSKELNKKNMGRYEK
HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MASEMKNRK
HHHHHHCCC
>Mature Secondary Structure
MKKGSLALVLGSLLVSGAFYTALAEEMPTKHQHNNMGESVELHFYYPIKGKQEPKNSHLV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEEEECCCCCCCCCCCCEE
VLVEPNIEVNKVIPEDYQKEFEKSLVFQLSSLLEKKGYSVSSFKDVSEIPQDTKEKALLV
EEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHEEEE
LRMDGNMAILEDLVEENDATREEKVIDMSSGYLNLNFVEPKSEDIIHSFGVDISKIKAVI
EEECCCHHHHHHHHHCCCCCHHHHHEECCCCEEEEEEECCCCHHHHHHHCCCHHHHHHHH
ERVVLDRMNSGGFVPKTFIHKIKETDHDRAIKKIMNQAYHKVMAQVSKELNKKNMGRYEK
HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MASEMKNRK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA