| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is hpcG [H]
Identifier: 108812518
GI number: 108812518
Start: 2640142
End: 2640945
Strand: Reverse
Name: hpcG [H]
Synonym: YPN_2357
Alternate gene names: 108812518
Gene position: 2640945-2640142 (Counterclockwise)
Preceding gene: 108812519
Following gene: 108812517
Centisome position: 58.24
GC content: 51.0
Gene sequence:
>804_bases ATGTTAGCTCAAAAGACGATTATCCAAATTGCACAACAGCTATACCAAGCTGAACAGTGTGGTGAACAAATCCGCCAAGT CTCGCTCGATTACCCCATGATAACCATTGAGGACGCTTATGCTATCCAGCGTCAATGGGTGGCCATGAAGATCCAACAAG GGCAGATATTGAGGGGCCATAAAATTGGCCTAACCTCGAAAGCCATGCAAACCAGTTCCCAAATTAATGAGCCGGATTAC GGCACCTTATTGGATCAGATGTTTTTCGCCGATGGCAGTGACATTCCCATTGACCGTTTCATTGTCCCGCGCCTTGAAGT CGAACTGGCATTTGTGCTGGACAAGCCGTTAAGTGGGCCAAACTGCACTCTGTTTGACGTTTACAACGCCACTGATTTTG TCATTCCGGCACTGGAATTGATCGATGCGCGTAGCCATCAAATTGATCCGCAATCACAGCGCCCTCGTAACGTCTGCGAC ACCATTTCAGATAATGCCGCCAATGCGGGGGTGATTCTGGGAGGGCGGCCCGTTAAACCGACGGAACTGGATTTACGTTG GGTCAGTGCACTGATGTACCGCAATGGCGTGATTGAAGAGAGCGGCGTTGCCGCGGCGGTATTGAATCACCCGGCTAACG GGGTGGCCTGGTTGGCTAACAAGCTGAGTGCTTACGATATACCGCTGGAAGTCGGGCAGATAATTCTTGGTGGATCCTTC ACCCGCCCGGTTCCAGCGCGTCGTGGTGATACTTTCCATGTGGATTATGGCCCGTTAGGTGCCATAAGTTGCCACTTTGT TTAG
Upstream 100 bases:
>100_bases AACGTTATCTGGCTTTGTCGTTCGTCATAGAGGAGCTGGATCCAACGCTTAGCTTTAAACAGAACAATGCTCATACATTG TTCCAACAGGGAACCTCTGC
Downstream 100 bases:
>100_bases GGGCTTAGTGATGTTTCCATTAACAAATAAATTTAAACAGGCACTGAAAGCAAAAAAACCACAAATTGGCTTATGGCTAG GTTTGTGTAGCAATTACAGT
Product: 2-oxo-hept-3-ene-1,7-dioate hydratase
Products: NA
Alternate protein names: OHED hydratase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MLAQKTIIQIAQQLYQAEQCGEQIRQVSLDYPMITIEDAYAIQRQWVAMKIQQGQILRGHKIGLTSKAMQTSSQINEPDY GTLLDQMFFADGSDIPIDRFIVPRLEVELAFVLDKPLSGPNCTLFDVYNATDFVIPALELIDARSHQIDPQSQRPRNVCD TISDNAANAGVILGGRPVKPTELDLRWVSALMYRNGVIEESGVAAAVLNHPANGVAWLANKLSAYDIPLEVGQIILGGSF TRPVPARRGDTFHVDYGPLGAISCHFV
Sequences:
>Translated_267_residues MLAQKTIIQIAQQLYQAEQCGEQIRQVSLDYPMITIEDAYAIQRQWVAMKIQQGQILRGHKIGLTSKAMQTSSQINEPDY GTLLDQMFFADGSDIPIDRFIVPRLEVELAFVLDKPLSGPNCTLFDVYNATDFVIPALELIDARSHQIDPQSQRPRNVCD TISDNAANAGVILGGRPVKPTELDLRWVSALMYRNGVIEESGVAAAVLNHPANGVAWLANKLSAYDIPLEVGQIILGGSF TRPVPARRGDTFHVDYGPLGAISCHFV >Mature_267_residues MLAQKTIIQIAQQLYQAEQCGEQIRQVSLDYPMITIEDAYAIQRQWVAMKIQQGQILRGHKIGLTSKAMQTSSQINEPDY GTLLDQMFFADGSDIPIDRFIVPRLEVELAFVLDKPLSGPNCTLFDVYNATDFVIPALELIDARSHQIDPQSQRPRNVCD TISDNAANAGVILGGRPVKPTELDLRWVSALMYRNGVIEESGVAAAVLNHPANGVAWLANKLSAYDIPLEVGQIILGGSF TRPVPARRGDTFHVDYGPLGAISCHFV
Specific function: Transforms 2-oxo-hept-3-ene-1,7-dioate (OHED) into 2,4- dihydoxy-hept-2-ene-1,7-dioic acid (HHED) [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=265, Percent_Identity=33.5849056603774, Blast_Score=154, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 - InterPro: IPR012690 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: 4.2.1.-
Molecular weight: Translated: 29433; Mature: 29433
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAQKTIIQIAQQLYQAEQCGEQIRQVSLDYPMITIEDAYAIQRQWVAMKIQQGQILRGH CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHEEEECCCCEECCC KIGLTSKAMQTSSQINEPDYGTLLDQMFFADGSDIPIDRFIVPRLEVELAFVLDKPLSGP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHEECCCEEEEEEEEEECCCCCC NCTLFDVYNATDFVIPALELIDARSHQIDPQSQRPRNVCDTISDNAANAGVILGGRPVKP CEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCC TELDLRWVSALMYRNGVIEESGVAAAVLNHPANGVAWLANKLSAYDIPLEVGQIILGGSF CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHCCEEECCCC TRPVPARRGDTFHVDYGPLGAISCHFV CCCCCCCCCCEEEECCCCCCCEEEECC >Mature Secondary Structure MLAQKTIIQIAQQLYQAEQCGEQIRQVSLDYPMITIEDAYAIQRQWVAMKIQQGQILRGH CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHEEEECCCCEECCC KIGLTSKAMQTSSQINEPDYGTLLDQMFFADGSDIPIDRFIVPRLEVELAFVLDKPLSGP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHEECCCEEEEEEEEEECCCCCC NCTLFDVYNATDFVIPALELIDARSHQIDPQSQRPRNVCDTISDNAANAGVILGGRPVKP CEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCC TELDLRWVSALMYRNGVIEESGVAAAVLNHPANGVAWLANKLSAYDIPLEVGQIILGGSF CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHCCEEECCCC TRPVPARRGDTFHVDYGPLGAISCHFV CCCCCCCCCCEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7737515 [H]