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The map label for this gene is nagZ [H]

Identifier: 108812176

GI number: 108812176

Start: 2278300

End: 2279319

Strand: Reverse

Name: nagZ [H]

Synonym: YPN_2014

Alternate gene names: 108812176

Gene position: 2279319-2278300 (Counterclockwise)

Preceding gene: 108812177

Following gene: 108812175

Centisome position: 50.27

GC content: 51.86

Gene sequence:

>1020_bases
ATGTTAGATGTTGCCAGCTATGAGCTGGATGCTGAAGAGCGTGAGATTTTAAAACACCCACTGGTGGGAGGGTTGATCTT
ATTCAGCCGTAATTTTCATGATGCGGAGCAGTTACGCGAATTAGTACGCCAAATCCGTGCAGCATCGCATGAACGTTTGG
TGGTCGCAGTGGATCAGGAAGGGGGGCGGGTCCAACGCTTTCGTGACGGTTTTACCCGCCTGCCAGCGGCTCAGTATTTC
GCGGCTATCAATGATGCCGCTACTGCGGCTCAACTGGCGCAAGAGGCGGGGTGGTTGATGGCAGCAGAAATGATGGCGAT
GGATATCGATATCAGTTTTGCTCCAGTACTGGATATTGGCCATGTCAGCGCCGCAATTGGTGAGCGTTCATTCCACAGTG
ATCCACAACAGGCGCGGATAATGGCGGAGTGTTTCATCCGTGGGATGCACAGTGCAGGGATGAAAACCACGGGCAAGCAT
TTTCCAGGGCACGGCGCAGTAACCGCAGATTCACATAAAGAGACGCCACATGATAATCGGCCACTGGCAGAAATCCGTAC
TCATGATATGGTTATATTTCGTGAATTGATCCAGCGGAAATTACTGGATGCGATTATGCCTGCTCACGTGATTTATACCG
AAGCCGATGCACGGCCTGCCAGCGGTTCTGCCTATTGGTTACAAGAGATATTGCGCCAAGAGCTAGGGTTCGAGGGCATC
ATTTTCTCTGATGATCTCTCGATGGAAGGGGCTGCGATCATGGGCAGTTACGCCGAGCGCGGCCAGGCATCGTTGGATGC
CGGTTGCGATATGATTTTGGTGTGTAATAACCGTCAGGGGGCCGTGAGTGTGCTGGATAATCTGTCTCCGATCAAAGCCG
ACCAACTGACCCGTTTGTACCATTCAGGGCAATTTGACCGCCAGACATTGATGGCTTCATCCCGTTGGCAACAGGCGAAT
AAAGCATTAACGGCACTCAGCGAACGTTGGGATGCACATAAACAAACGTTGGGGCAATAG

Upstream 100 bases:

>100_bases
TTTAATTTGTCTTTTTAAGCCCTGCGGCACCAAGCCCGCCGCTTCAAGCACGAAGGGTCGTTATCAATCTGAATAAAGTG
AGGTGACCGTGGGTCCCGTG

Downstream 100 bases:

>100_bases
GAGTAGCGCCGGGTACGCTTCGGTATTATTACTCGCCTCATAAGGGCCAAGAGCTCCCTCTTTTCTGTGGGGGCTTTGAT
CAGTAACGCACACTGCCGCG

Product: beta-hexosaminidase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQEGGRVQRFRDGFTRLPAAQYF
AAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKH
FPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELGFEGI
IFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQLTRLYHSGQFDRQTLMASSRWQQAN
KALTALSERWDAHKQTLGQ

Sequences:

>Translated_339_residues
MLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQEGGRVQRFRDGFTRLPAAQYF
AAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKH
FPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELGFEGI
IFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQLTRLYHSGQFDRQTLMASSRWQQAN
KALTALSERWDAHKQTLGQ
>Mature_339_residues
MLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQEGGRVQRFRDGFTRLPAAQYF
AAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKH
FPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELGFEGI
IFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQLTRLYHSGQFDRQTLMASSRWQQAN
KALTALSERWDAHKQTLGQ

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=334, Percent_Identity=76.3473053892216, Blast_Score=534, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 37595; Mature: 37595

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00775 GLYCOSYL_HYDROL_F3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQE
CCCCCCCCCCHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
GGRVQRFRDGFTRLPAAQYFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIG
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHH
HVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETPHDNR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCC
PLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELGFEGI
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCE
IFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQLTRLY
EEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHH
HSGQFDRQTLMASSRWQQANKALTALSERWDAHKQTLGQ
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQE
CCCCCCCCCCHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
GGRVQRFRDGFTRLPAAQYFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIG
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHH
HVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETPHDNR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCC
PLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELGFEGI
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCHHHHHHHHHHHCCCCCE
IFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQLTRLY
EEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHH
HSGQFDRQTLMASSRWQQANKALTALSERWDAHKQTLGQ
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA