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The map label for this gene is ycfP [C]

Identifier: 108812175

GI number: 108812175

Start: 2277630

End: 2278172

Strand: Reverse

Name: ycfP [C]

Synonym: YPN_2013

Alternate gene names: 108812175

Gene position: 2278172-2277630 (Counterclockwise)

Preceding gene: 108812176

Following gene: 108812174

Centisome position: 50.24

GC content: 42.73

Gene sequence:

>543_bases
ATGATCGTCTATTTACATGGTTTTGATTCCAATAGCCCCGGCAATCACGAGAAAGTTTTACAGCTACAATTTATCGATCC
TGATGTGCGCTTTATCAGTTACAGCACCTTACATCCACGGCATGACATGCAATATTTGTTGAAAGAAGTGGATAAAGCCA
TTCAGCAGGGGGGCGATGAAAAATCCTTGATTTGTGGTGTTGGATTAGGCGGTTTTTGGGCTGAACGTATTGGTTTCTTA
TGTGGTATTCGCCAGGTAGCGTTCAACCCCAATCTCTATCCGCAAGAAAATATGAGCGGCAAAATTGATCGTCCGGAAGA
GTACATTGATATTGCCAGTAAATGTATTGATGGCTTTCGTGAAAAAAATCGGGATCGCTGCTTGGTGGTGCTCTCTCGCC
ATGATGAAATGCTCGACAGTCAGCGTACTGCGGGTGATTTACATCCTTACTATGAGATCGTATGGGATGATAAGCAGAAC
CATAAATTTAAAGATCTCTCACCGCATCTACAACGGATCAAAGCATTTAAAACGCTGGGTTAA

Upstream 100 bases:

>100_bases
ATTACTCGCCTCATAAGGGCCAAGAGCTCCCTCTTTTCTGTGGGGGCTTTGATCAGTAACGCACACTGCCGCGCAGAAAA
ATGCCGTAGCGAGGATAAAT

Downstream 100 bases:

>100_bases
CGGCCTGATTTGTTAATGGCAGGTTAATTGAAAAAACGCGAATGGCCGGTTATTCGGCTTGGGACGGGTTTTTTACGGTC
TATTCCAAGCCATTTTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MIVYLHGFDSNSPGNHEKVLQLQFIDPDVRFISYSTLHPRHDMQYLLKEVDKAIQQGGDEKSLICGVGLGGFWAERIGFL
CGIRQVAFNPNLYPQENMSGKIDRPEEYIDIASKCIDGFREKNRDRCLVVLSRHDEMLDSQRTAGDLHPYYEIVWDDKQN
HKFKDLSPHLQRIKAFKTLG

Sequences:

>Translated_180_residues
MIVYLHGFDSNSPGNHEKVLQLQFIDPDVRFISYSTLHPRHDMQYLLKEVDKAIQQGGDEKSLICGVGLGGFWAERIGFL
CGIRQVAFNPNLYPQENMSGKIDRPEEYIDIASKCIDGFREKNRDRCLVVLSRHDEMLDSQRTAGDLHPYYEIVWDDKQN
HKFKDLSPHLQRIKAFKTLG
>Mature_180_residues
MIVYLHGFDSNSPGNHEKVLQLQFIDPDVRFISYSTLHPRHDMQYLLKEVDKAIQQGGDEKSLICGVGLGGFWAERIGFL
CGIRQVAFNPNLYPQENMSGKIDRPEEYIDIASKCIDGFREKNRDRCLVVLSRHDEMLDSQRTAGDLHPYYEIVWDDKQN
HKFKDLSPHLQRIKAFKTLG

Specific function: Unknown

COG id: COG3150

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0227 family

Homologues:

Organism=Escherichia coli, GI87081832, Length=180, Percent_Identity=80, Blast_Score=313, Evalue=5e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1593_YERP3 (A7FH42)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001400570.1
- ProteinModelPortal:   A7FH42
- STRING:   A7FH42
- GeneID:   5385329
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_1593
- eggNOG:   COG3150
- HOGENOM:   HBG297018
- OMA:   DATSPGN
- ProtClustDB:   PRK04940
- BioCyc:   YPSE349747:YPSIP31758_1593-MONOMER
- HAMAP:   MF_01047
- InterPro:   IPR022987
- InterPro:   IPR008886

Pfam domain/function: PF05728 UPF0227

EC number: NA

Molecular weight: Translated: 20824; Mature: 20824

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVYLHGFDSNSPGNHEKVLQLQFIDPDVRFISYSTLHPRHDMQYLLKEVDKAIQQGGDE
CEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
KSLICGVGLGGFWAERIGFLCGIRQVAFNPNLYPQENMSGKIDRPEEYIDIASKCIDGFR
CEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EKNRDRCLVVLSRHDEMLDSQRTAGDLHPYYEIVWDDKQNHKFKDLSPHLQRIKAFKTLG
HCCCCEEEEEECCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIVYLHGFDSNSPGNHEKVLQLQFIDPDVRFISYSTLHPRHDMQYLLKEVDKAIQQGGDE
CEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
KSLICGVGLGGFWAERIGFLCGIRQVAFNPNLYPQENMSGKIDRPEEYIDIASKCIDGFR
CEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EKNRDRCLVVLSRHDEMLDSQRTAGDLHPYYEIVWDDKQNHKFKDLSPHLQRIKAFKTLG
HCCCCEEEEEECCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA