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The map label for this gene is 108811337

Identifier: 108811337

GI number: 108811337

Start: 1336939

End: 1337367

Strand: Reverse

Name: 108811337

Synonym: YPN_1174

Alternate gene names: NA

Gene position: 1337367-1336939 (Counterclockwise)

Preceding gene: 108811338

Following gene: 108811332

Centisome position: 29.49

GC content: 50.82

Gene sequence:

>429_bases
ATGAGCACTTGGTTAATTTACGCCCTGCTGTCTGCCTTGAGTGCCTCGCTGGTGGCAATCTTCGGTAAAATCGGTCTGCA
GCATTTAGATGCTAATACCGCCACCGCTGTACGGGCGGTGGTGATGGCGCTATTTTTAGTCGGCGTGGTCGTGGTTCAGG
GGAAATTTAATCTGGTGGGTACCGTGCTGGCCGATAAAAAAGCCCTGTTGTTTATCGTACTGAGTGGCGTTGCGGGGGCT
TTATCCTGGCTGTTCTACTTTATGGCCATTAAAAATGGCACGGTTTCGCAAGTGGCTCCCATTGATAAACTCAGTGTGGT
GTTTGCCGTGCTCTTGGCGTTTATTCTGTTTGGCGAAAAAATCTCATTAGTTGCCGGGCTAGGCGTAGCACTGATTACTG
CCGGCGCATTGATGGTGGCTCTGGGGTAA

Upstream 100 bases:

>100_bases
CCCTAAGGTTTTTTCAATGCCAGACTGCTGATTAGGGCTAGGAAAATGAAACTCAGCGGCGTAGCATCCTATTTTTGAAT
GCTAATAGGTCTTATTTGTT

Downstream 100 bases:

>100_bases
TACCCTCCCCAAAAACATAATTAATTAAACCACCGCCCATTGATATTATTAAATTAATCTTAGATGACCGCCTGAGCGGT
CATTTTTAATTGCGCCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF6 [H]

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSTWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVGTVLADKKALLFIVLSGVAGA
LSWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEKISLVAGLGVALITAGALMVALG

Sequences:

>Translated_142_residues
MSTWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVGTVLADKKALLFIVLSGVAGA
LSWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEKISLVAGLGVALITAGALMVALG
>Mature_141_residues
STWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVGTVLADKKALLFIVLSGVAGAL
SWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEKISLVAGLGVALITAGALMVALG

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 14680; Mature: 14549

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TVLADKKALLFIVLSGVAGALSWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCH
ISLVAGLGVALITAGALMVALG
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STWLIYALLSALSASLVAIFGKIGLQHLDANTATAVRAVVMALFLVGVVVVQGKFNLVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TVLADKKALLFIVLSGVAGALSWLFYFMAIKNGTVSQVAPIDKLSVVFAVLLAFILFGEK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCH
ISLVAGLGVALITAGALMVALG
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655697 [H]