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The map label for this gene is kdpE [H]

Identifier: 108811338

GI number: 108811338

Start: 1337462

End: 1338091

Strand: Reverse

Name: kdpE [H]

Synonym: YPN_1175

Alternate gene names: 108811338

Gene position: 1338091-1337462 (Counterclockwise)

Preceding gene: 108811339

Following gene: 108811337

Centisome position: 29.51

GC content: 50.48

Gene sequence:

>630_bases
GTGCGTATTGCACTGGAGAGTGAGGGCTGGCGAGTATTTGAGAGTGAGACGTTACAACGGGGTCTTATTGAAGCCGGTAC
CCGTAAGCCTGATTTGATCATTCTGGATTTGGGGCTGCCGGATGGTGATGGCCTGAACTATATTCAAGATCTGCGCCAGT
GGAGCGCTATCCCAATCATTGTGCTATCTGCCCGTAACAATGAAGAAGATAAAGTTGCCGCACTGGATGCGGGAGCTGAT
GACTATTTGAGTAAGCCTTTTGGTATCAGCGAATTACTGGCTCGGGTACGTGTGGCCTTACGTCGCCACAGCGGAGCCAG
TCAGGAAAGCCCGTTAGTGAATTTTGCTGATATCAGCGTCGATTTGATCAACCGCCAAGTCACCCGTGCGGGTGAAAATC
TTCACCTGACGCCCATCGAATTTCGTCTGCTTACGGCACTGCTGGCTAATGCCGGTAAGGTCATTACTCAGCGCCAGCTA
TTGAATCAGGTTTGGGGGCCGAATTATGTCGAGCACAGTCATTACCTGCGCATTTACATGGGGCATTTACGCCAGAAATT
AGAAGCCGATCCCACCCGTCCTAAACACCTGTTAACGGAAACCGGTGTTGGCTATCGTTTTATTCCCTAA

Upstream 100 bases:

>100_bases
CTTGAAGTATGACGAGTAAGTATGACGAGCAAAAGGAGAGCAAATTATATCCCCGACACACATCCTCATTGTAGAAGACG
AAAAAGAGATCCGGCGCTTT

Downstream 100 bases:

>100_bases
GGTTTTTTCAATGCCAGACTGCTGATTAGGGCTAGGAAAATGAAACTCAGCGGCGTAGCATCCTATTTTTGAATGCTAAT
AGGTCTTATTTGTTATGAGC

Product: DNA-binding transcriptional activator KdpE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRIALESEGWRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLNYIQDLRQWSAIPIIVLSARNNEEDKVAALDAGAD
DYLSKPFGISELLARVRVALRRHSGASQESPLVNFADISVDLINRQVTRAGENLHLTPIEFRLLTALLANAGKVITQRQL
LNQVWGPNYVEHSHYLRIYMGHLRQKLEADPTRPKHLLTETGVGYRFIP

Sequences:

>Translated_209_residues
MRIALESEGWRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLNYIQDLRQWSAIPIIVLSARNNEEDKVAALDAGAD
DYLSKPFGISELLARVRVALRRHSGASQESPLVNFADISVDLINRQVTRAGENLHLTPIEFRLLTALLANAGKVITQRQL
LNQVWGPNYVEHSHYLRIYMGHLRQKLEADPTRPKHLLTETGVGYRFIP
>Mature_209_residues
MRIALESEGWRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLNYIQDLRQWSAIPIIVLSARNNEEDKVAALDAGAD
DYLSKPFGISELLARVRVALRRHSGASQESPLVNFADISVDLINRQVTRAGENLHLTPIEFRLLTALLANAGKVITQRQL
LNQVWGPNYVEHSHYLRIYMGHLRQKLEADPTRPKHLLTETGVGYRFIP

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=208, Percent_Identity=75, Blast_Score=333, Evalue=3e-93,
Organism=Escherichia coli, GI1787375, Length=212, Percent_Identity=35.377358490566, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1786599, Length=208, Percent_Identity=35.0961538461538, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1786784, Length=208, Percent_Identity=39.4230769230769, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1789809, Length=184, Percent_Identity=36.4130434782609, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87082012, Length=177, Percent_Identity=37.8531073446328, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1790552, Length=209, Percent_Identity=35.4066985645933, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI1788394, Length=184, Percent_Identity=38.0434782608696, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1790860, Length=205, Percent_Identity=35.1219512195122, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789402, Length=176, Percent_Identity=35.7954545454545, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790863, Length=218, Percent_Identity=30.7339449541284, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787229, Length=182, Percent_Identity=33.5164835164835, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI2367329, Length=155, Percent_Identity=33.5483870967742, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI145693140, Length=191, Percent_Identity=33.5078534031414, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 23511; Mature: 23511

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIALESEGWRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLNYIQDLRQWSAIPII
CEEEEECCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEE
VLSARNNEEDKVAALDAGADDYLSKPFGISELLARVRVALRRHSGASQESPLVNFADISV
EEECCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH
DLINRQVTRAGENLHLTPIEFRLLTALLANAGKVITQRQLLNQVWGPNYVEHSHYLRIYM
HHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GHLRQKLEADPTRPKHLLTETGVGYRFIP
HHHHHHHCCCCCCCHHHHHHCCCCEEECC
>Mature Secondary Structure
MRIALESEGWRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLNYIQDLRQWSAIPII
CEEEEECCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEE
VLSARNNEEDKVAALDAGADDYLSKPFGISELLARVRVALRRHSGASQESPLVNFADISV
EEECCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH
DLINRQVTRAGENLHLTPIEFRLLTALLANAGKVITQRQLLNQVWGPNYVEHSHYLRIYM
HHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
GHLRQKLEADPTRPKHLLTETGVGYRFIP
HHHHHHHCCCCCCCHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]