Click here to switch to the map view.

The map label for this gene is 108811332

Identifier: 108811332

GI number: 108811332

Start: 1333089

End: 1333457

Strand: Reverse

Name: 108811332

Synonym: YPN_1169

Alternate gene names: NA

Gene position: 1333457-1333089 (Counterclockwise)

Preceding gene: 108811337

Following gene: 108811326

Centisome position: 29.41

GC content: 46.61

Gene sequence:

>369_bases
GTGGTGAAACAGTTTACATCAGGACTCATAATTTCAACATTTTTCCTGGCAGTGCCAGGCTATGCAGCCAGTTTTGACTG
CGACAACGCAAAAGGCTACGTAGAGACATCAATCTGTACCAACCCTGTTCTTTCTAAACTGGATGATACACTTCTCAGCG
TTTATGCTAAGGCGCAGGCTGCAGCACCTGACCAAGAAATCAATATTCGCAATGAACAGCGTGAATGGCTAAAGAACTCA
CGTAATACTCTCACGAGTGAAGATGCCTTGATTTTGTCGTACGAGGCCCGGATTGCTCAGCTTTCGAAAGCGAATGTTTC
GATTCCAGCATCGGCTGCATCTGAAACCCCGGTATCAACGCCAGACTGA

Upstream 100 bases:

>100_bases
TTTTTTCAAGAAAAACGCTGAAGGTGATTACTTTTTGTCTTTCGATCAATAATACTCAATGGCTCAATATGATAACTAAA
TGAGAATGAAGGGATAAAAC

Downstream 100 bases:

>100_bases
ATCCTCTCAATCTGTCGATTTCTCTCAATGAGTCGCCTCTTGTAGGATAATGCCCCTAAAAATGGGGGCATTATCTGTGA
TGTCTATGATAACCACTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQAAAPDQEINIRNEQREWLKNS
RNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVSTPD

Sequences:

>Translated_122_residues
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQAAAPDQEINIRNEQREWLKNS
RNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVSTPD
>Mature_122_residues
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQAAAPDQEINIRNEQREWLKNS
RNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVSTPD

Specific function: Unknown

COG id: COG4461

COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13190; Mature: 13190

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHH
AAPDQEINIRNEQREWLKNSRNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVST
CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCC
PD
CC
>Mature Secondary Structure
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHH
AAPDQEINIRNEQREWLKNSRNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVST
CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCC
PD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA