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The map label for this gene is ybfF [H]

Identifier: 108811286

GI number: 108811286

Start: 1292174

End: 1292941

Strand: Reverse

Name: ybfF [H]

Synonym: YPN_1123

Alternate gene names: 108811286

Gene position: 1292941-1292174 (Counterclockwise)

Preceding gene: 108811287

Following gene: 108811285

Centisome position: 28.51

GC content: 48.57

Gene sequence:

>768_bases
ATGAAATTAAATTTCCGCTTACAAAACGCACCGTCCCCTACCTCAGCCCTGCCAATCATTCTGATCCATGGATTATTCGG
CAATTTGGATAATCTAGGTGTATTGGCTCGCGATCTGCAGCAACACCATAATGTTATTCAGGTCGATTTACGTAACCATG
GCTTATCTCCCCGTGCACCACAGATGGATTATCCCGTAATAGCGCAGGATGTGTTGGCGTTAATGGATGAACTGGCAATA
ACACAAGCCATTATTATCGGCCATTCCATGGGCGGAAAAGTGGCGATGGCAATGACCGCGCTTGCCCCAAATCGGGTTGA
AAAACTGGTAGCGATCGATATTGCGCCAGTGAATTATCAGGTACGCCGTCATGACACTATTTTCGCCGCGCTTAATGCTG
TGAGTGCCGCTGGTGTGACTCAGCGCAACGAAGCCGCTCAACTGATGCGCACGTTAATAAAAGAAGAAGGGGTTATTCAG
TTCTTACTAAAATCATTTCAGGGCGGTGAATGGCGATTTAATGTCCCTGCCCTCTGGGATCAGTACGAGAACATTATTGG
CTGGCAGCCCATTCCCCCTTGGCCACATCCTATTTTGTTTATCCGTGGTGAGTTATCTCCTTATATTCAAGACAGCTATC
GAGATGATATTGCCCGTCAGTTCCCACAAGCCCGTGCGCATGTCGTCGCCGGAACCGGTCATTGGGTCCATGCGGAAAAA
CCAGATTCTGTGTTGCGGGCAATCCACCGTTTCCTTGATGCCGCATAA

Upstream 100 bases:

>100_bases
TCTGCGCCTAAGGTCGCCCTCACTTAAGCATCAGAAAGATCAACTTCAGGCATTCATGGTACCCTAACCAGAATATCTCT
CAGTATGAACGTCGCTCGCT

Downstream 100 bases:

>100_bases
CGCAAGATTCCCGTCATGTTGATTAAAAATCATACCTTGGGGAAAAGAAATGTATTTCCTGTGGAAAAATTGTGCAAAAA
AGAACGAATTAGCCCAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKLNFRLQNAPSPTSALPIILIHGLFGNLDNLGVLARDLQQHHNVIQVDLRNHGLSPRAPQMDYPVIAQDVLALMDELAI
TQAIIIGHSMGGKVAMAMTALAPNRVEKLVAIDIAPVNYQVRRHDTIFAALNAVSAAGVTQRNEAAQLMRTLIKEEGVIQ
FLLKSFQGGEWRFNVPALWDQYENIIGWQPIPPWPHPILFIRGELSPYIQDSYRDDIARQFPQARAHVVAGTGHWVHAEK
PDSVLRAIHRFLDAA

Sequences:

>Translated_255_residues
MKLNFRLQNAPSPTSALPIILIHGLFGNLDNLGVLARDLQQHHNVIQVDLRNHGLSPRAPQMDYPVIAQDVLALMDELAI
TQAIIIGHSMGGKVAMAMTALAPNRVEKLVAIDIAPVNYQVRRHDTIFAALNAVSAAGVTQRNEAAQLMRTLIKEEGVIQ
FLLKSFQGGEWRFNVPALWDQYENIIGWQPIPPWPHPILFIRGELSPYIQDSYRDDIARQFPQARAHVVAGTGHWVHAEK
PDSVLRAIHRFLDAA
>Mature_255_residues
MKLNFRLQNAPSPTSALPIILIHGLFGNLDNLGVLARDLQQHHNVIQVDLRNHGLSPRAPQMDYPVIAQDVLALMDELAI
TQAIIIGHSMGGKVAMAMTALAPNRVEKLVAIDIAPVNYQVRRHDTIFAALNAVSAAGVTQRNEAAQLMRTLIKEEGVIQ
FLLKSFQGGEWRFNVPALWDQYENIIGWQPIPPWPHPILFIRGELSPYIQDSYRDDIARQFPQARAHVVAGTGHWVHAEK
PDSVLRAIHRFLDAA

Specific function: Displays esterase activity toward palmitoyl-CoA, malonyl-CoA and pNP-butyrate [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200008, Length=265, Percent_Identity=34.7169811320755, Blast_Score=150, Evalue=1e-36,
Organism=Homo sapiens, GI23200012, Length=251, Percent_Identity=35.4581673306773, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI223941839, Length=256, Percent_Identity=30.46875, Blast_Score=110, Evalue=9e-25,
Organism=Escherichia coli, GI1786902, Length=253, Percent_Identity=65.6126482213439, Blast_Score=351, Evalue=3e-98,
Organism=Caenorhabditis elegans, GI17508535, Length=267, Percent_Identity=29.9625468164794, Blast_Score=138, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17507063, Length=260, Percent_Identity=28.4615384615385, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6321468, Length=265, Percent_Identity=33.2075471698113, Blast_Score=107, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24640348, Length=272, Percent_Identity=26.8382352941176, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24646055, Length=271, Percent_Identity=25.4612546125461, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 28452; Mature: 28452

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNFRLQNAPSPTSALPIILIHGLFGNLDNLGVLARDLQQHHNVIQVDLRNHGLSPRAP
CEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
QMDYPVIAQDVLALMDELAITQAIIIGHSMGGKVAMAMTALAPNRVEKLVAIDIAPVNYQ
CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCHHHHHHEEEEEEECCCEE
VRRHDTIFAALNAVSAAGVTQRNEAAQLMRTLIKEEGVIQFLLKSFQGGEWRFNVPALWD
EHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCHHHH
QYENIIGWQPIPPWPHPILFIRGELSPYIQDSYRDDIARQFPQARAHVVAGTGHWVHAEK
HHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCEEECCC
PDSVLRAIHRFLDAA
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLNFRLQNAPSPTSALPIILIHGLFGNLDNLGVLARDLQQHHNVIQVDLRNHGLSPRAP
CEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
QMDYPVIAQDVLALMDELAITQAIIIGHSMGGKVAMAMTALAPNRVEKLVAIDIAPVNYQ
CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCHHHHHHEEEEEEECCCEE
VRRHDTIFAALNAVSAAGVTQRNEAAQLMRTLIKEEGVIQFLLKSFQGGEWRFNVPALWD
EHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCHHHH
QYENIIGWQPIPPWPHPILFIRGELSPYIQDSYRDDIARQFPQARAHVVAGTGHWVHAEK
HHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCEEECCC
PDSVLRAIHRFLDAA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10493123 [H]