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The map label for this gene is 108811243

Identifier: 108811243

GI number: 108811243

Start: 1242339

End: 1242830

Strand: Reverse

Name: 108811243

Synonym: YPN_1079

Alternate gene names: NA

Gene position: 1242830-1242339 (Counterclockwise)

Preceding gene: 108811245

Following gene: 108811241

Centisome position: 27.41

GC content: 36.18

Gene sequence:

>492_bases
ATGAGATGCATGATGAACGGTAGAATAACAACTTTTTTTGAAGATAAAGGCTTTGGTTTTATCACCGATGAAAACGGCGA
TAACCGTTATTTTCACGTTATAAAAGTTGCTAATCCCGAGATGATCAAAAAGGGTGCTGAAGTAACCTTTGAACCGACAA
CCAACACCAAAGGGTTATCAGCATTCGCTGTAAAAGTAGCGATTGAGAGCAAATATATATTCATCGCTAATGAAAGGATA
AAGCTGACCAGTATCAAGTCATTCAATACCTTTACAAAAGAAGTCCCTGCTCAAGCCGAGGTTGATAAAGCCAATACAAT
ATTATCAGTAAACTTACTGATGAATAAAATTAGGCCACAGGAAGAGGACATTTCAGAGAAAACCATACCACTGAAAATGC
TGTCGATAACAACATTCCAAAATGTGACATACACATTTTCTGAACACGAAGTCGATATTGATAGTACGGTTGCTAAATTA
AAGAGTATTTAA

Upstream 100 bases:

>100_bases
CACCGTTCCCCCTCTCGGGGTCTAAACGCCTCCGGTAAACTGCCAGACTGTATCTGAACGTCATTCACCTGTATTATACT
TATCCATTGGATACACTAAT

Downstream 100 bases:

>100_bases
TATTGATTTTGGGACTTGCCAAGGCCAGCTAGCCCTGAAATATTTGGGGCTACCAGTCGCAGGTAGTTGGTGATAGTCGG
TGATAGTCGGTGATAGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Cold Shock Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRCMMNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLSAFAVKVAIESKYIFIANERI
KLTSIKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQEEDISEKTIPLKMLSITTFQNVTYTFSEHEVDIDSTVAKL
KSI

Sequences:

>Translated_163_residues
MRCMMNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLSAFAVKVAIESKYIFIANERI
KLTSIKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQEEDISEKTIPLKMLSITTFQNVTYTFSEHEVDIDSTVAKL
KSI
>Mature_163_residues
MRCMMNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLSAFAVKVAIESKYIFIANERI
KLTSIKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQEEDISEKTIPLKMLSITTFQNVTYTFSEHEVDIDSTVAKL
KSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18457; Mature: 18457

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCMMNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLS
CEEEECCEEEEEEECCCCEEEECCCCCCEEEEEEEECCHHHHHCCCCEEEECCCCCCCCE
AFAVKVAIESKYIFIANERIKLTSIKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQ
EEEEEEEEECEEEEEECCEEEEEEECCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHCCCC
EEDISEKTIPLKMLSITTFQNVTYTFSEHEVDIDSTVAKLKSI
CCCCCCCCCCEEEEEEEEECCEEEEECCCEECHHHHHHHHHCC
>Mature Secondary Structure
MRCMMNGRITTFFEDKGFGFITDENGDNRYFHVIKVANPEMIKKGAEVTFEPTTNTKGLS
CEEEECCEEEEEEECCCCEEEECCCCCCEEEEEEEECCHHHHHCCCCEEEECCCCCCCCE
AFAVKVAIESKYIFIANERIKLTSIKSFNTFTKEVPAQAEVDKANTILSVNLLMNKIRPQ
EEEEEEEEECEEEEEECCEEEEEEECCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHCCCC
EEDISEKTIPLKMLSITTFQNVTYTFSEHEVDIDSTVAKLKSI
CCCCCCCCCCEEEEEEEEECCEEEEECCCEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA