Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811241

Identifier: 108811241

GI number: 108811241

Start: 1240024

End: 1240878

Strand: Reverse

Name: 108811241

Synonym: YPN_1077

Alternate gene names: NA

Gene position: 1240878-1240024 (Counterclockwise)

Preceding gene: 108811243

Following gene: 108811240

Centisome position: 27.36

GC content: 38.01

Gene sequence:

>855_bases
ATGGGCGTTTTGTACTTTTTGTCGATCATTGCTACCCCGTTGTTTTTTATGATCATTGGCTATATCGACTCAAATGACAA
AATCGATCAGAAAGACATTTTCAGAAAATTAAAATCGATTATAACCATTATTATTTTCTGGAACGTTCTCTTCTACTTTA
TCAATGAAGATGGTTTCAAACGGGGTTATTTCCTGCAAAGCTGGCTTCTGTTTAGTATCGCCATCATTTACCTCATAAAC
CCGATTATCTCCAAGATATTAAAAAGTAACAGGACAGCTATCATCACGCTCTCTTGCCTGGTCATTTTCTCCGTGACTAT
TGATCTGATCAGTGCCTTCAGTGAGCGACCATACCTTATTGATTTTCCACAATACTTTAGGCTATGGACTTGGATTTTTT
ACTACATGACGGGCCGATTCCTCTGCTCGCGAATTTGTCAGAAGATGACAAAATTGCCAAAGGTTCGTCTTGCTGCCAAG
TTACTGCTGCTCCCTACATCCATCTCGATGTATTATTACGAAAGTTTCATGTCAATTTACGTGTATAAAACCGTGAACGC
GAGTTACTTCCTTGATAACTTCCACGTTTTAGTCCTCAGCTTATGTCTGTTTGTTATATTTGATAACTTTGACACTCAAT
ATGAATGGATAAAGAAAACATTGGCGTATATCAGCCCATCAATGATTGGCGTTTATATATTGCATGATGGAATTTTCTAC
TTTATTGCCAGCGCATATAACTTATCAGATGTAACGTTAAGATTTACGCTGCTGTTATCCGTATTTGCCGCCTCAGTTTT
ATTGTCACGGGCCCTATTACTGAATAAATACACCTCGCGCTTTATCTCATTCTGA

Upstream 100 bases:

>100_bases
CGGTTTACATGCCCTAAAAACGTTGAGCTGCTTTTCCGCTGTTACGTTCTACTCCGCCAGTAAAACCTGTACTGAACAGT
GCTTTTTAAGTGGGGAAGTC

Downstream 100 bases:

>100_bases
TCGAAAAAGACCTGATTGTGATTATCTGGGAACGTGCAGATCTGATGGAAGGTTATCACTATCCACGTTAGTTGTTGTGG
CTCGGGGTGATCACCAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MGVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLIN
PIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFPQYFRLWTWIFYYMTGRFLCSRICQKMTKLPKVRLAAK
LLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCLFVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFY
FIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFISF

Sequences:

>Translated_284_residues
MGVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLIN
PIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFPQYFRLWTWIFYYMTGRFLCSRICQKMTKLPKVRLAAK
LLLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCLFVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFY
FIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFISF
>Mature_283_residues
GVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFKRGYFLQSWLLFSIAIIYLINP
IISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLIDFPQYFRLWTWIFYYMTGRFLCSRICQKMTKLPKVRLAAKL
LLLPTSISMYYYESFMSIYVYKTVNASYFLDNFHVLVLSLCLFVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFYF
IASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFISF

Specific function: Unknown

COG id: COG3274

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33394; Mature: 33263

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGYFLQSWLLFSIAIIYLINPIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEE
DFPQYFRLWTWIFYYMTGRFLCSRICQKMTKLPKVRLAAKLLLLPTSISMYYYESFMSIY
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
VYKTVNASYFLDNFHVLVLSLCLFVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFY
HEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
FIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFISF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GVLYFLSIIATPLFFMIIGYIDSNDKIDQKDIFRKLKSIITIIIFWNVLFYFINEDGFK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGYFLQSWLLFSIAIIYLINPIISKILKSNRTAIITLSCLVIFSVTIDLISAFSERPYLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEE
DFPQYFRLWTWIFYYMTGRFLCSRICQKMTKLPKVRLAAKLLLLPTSISMYYYESFMSIY
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
VYKTVNASYFLDNFHVLVLSLCLFVIFDNFDTQYEWIKKTLAYISPSMIGVYILHDGIFY
HEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
FIASAYNLSDVTLRFTLLLSVFAASVLLSRALLLNKYTSRFISF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA