Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is crcB1
Identifier: 108811245
GI number: 108811245
Start: 1243729
End: 1244112
Strand: Reverse
Name: crcB1
Synonym: YPN_1081
Alternate gene names: 108811245
Gene position: 1244112-1243729 (Counterclockwise)
Preceding gene: 108811247
Following gene: 108811243
Centisome position: 27.44
GC content: 46.88
Gene sequence:
>384_bases ATGTTTAATACATTACTTGCAGTGTTTATTGGTGGCGGTGTGGGCAGCATGGCCCGTTGGTTGGTCAGTTTGAAGTTAAA CAGTGCATCGGCTCACTTACCGGTAGGTACGCTTATTGTCAACCTGGTCGGTGCCTTTATTATTGGCCTGACACTGGCGT TTTTTAGCCGAATGACTCATATTGATCCCGTTTGGAAGCTACTGATTACCACCGGTTTTTGTGGGGGCCTCACGACGTTC TCCACCTTTTCTGTCGAAGTGGTCTATCTAATCCAAGAGGGAAAATTAGCGTGGGCTGCCGGAACAATTTTGCTCAATGT GGCGGGTTCACTGGCAATGACGATGCTGGCTTTTATATTGGTCAATAACTTTGCCAGCCAATAA
Upstream 100 bases:
>100_bases TTCTCATTAGGGTACGTAGGGCTACCAACGAGCCTTTCTGAAAAGATTTACGGGTAAACAAAACGCCCCAATGGTCAGTA TCTGTTAGAGAAAAGTGCCT
Downstream 100 bases:
>100_bases TGGCTAGTGGCCTATGATTAAACACTTCAAGGAGTGAATAGCGTGGCTATGGTGTTTATTCAGTAGAAAATAGTGCTACT AATAATATCGCCTTAATGTT
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRMTHIDPVWKLLITTGFCGGLTTF STFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFILVNNFASQ
Sequences:
>Translated_127_residues MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRMTHIDPVWKLLITTGFCGGLTTF STFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFILVNNFASQ >Mature_127_residues MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRMTHIDPVWKLLITTGFCGGLTTF STFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFILVNNFASQ
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=120, Percent_Identity=65, Blast_Score=158, Evalue=8e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB1_YERPE (Q8ZDH2)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AH0316 - RefSeq: NP_668494.1 - RefSeq: NP_992487.1 - RefSeq: YP_002347552.1 - GeneID: 1146115 - GeneID: 1175425 - GeneID: 2764513 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO2596 - KEGG: ypk:y1168 - KEGG: ypm:YP_1118 - HOGENOM: HBG753179 - OMA: IASHPEW - ProtClustDB: PRK14196 - BioCyc: YPES187410:Y1168-MONOMER - BioCyc: YPES214092:YPO2596-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13483; Mature: 13483
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xf7331e4)-; HASH(0xe3e7e94)-; HASH(0xe3e79a8)-; HASH(0xf41c464)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRMTH CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC IDPVWKLLITTGFCGGLTTFSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFIL CCHHHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHH VNNFASQ HHHHCCH >Mature Secondary Structure MFNTLLAVFIGGGVGSMARWLVSLKLNSASAHLPVGTLIVNLVGAFIIGLTLAFFSRMTH CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC IDPVWKLLITTGFCGGLTTFSTFSVEVVYLIQEGKLAWAAGTILLNVAGSLAMTMLAFIL CCHHHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHH VNNFASQ HHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430