| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
Click here to switch to the map view.
The map label for this gene is bglB [H]
Identifier: 108811203
GI number: 108811203
Start: 1195614
End: 1197995
Strand: Reverse
Name: bglB [H]
Synonym: YPN_1038
Alternate gene names: 108811203
Gene position: 1197995-1195614 (Counterclockwise)
Preceding gene: 108811204
Following gene: 108811200
Centisome position: 26.42
GC content: 48.66
Gene sequence:
>2382_bases ATGAATCTGAATAAAACAGGTTTTTTCACAGCGTTTACTTTCCTTTCAGCTCCCGTTTGGGCCACACCTCAGTTAAAAGA GGCTGAGTCTATTCCCTCTGTCATCGCGGCAATGACACTGGAAGAAAAAGCAGCCTTTGTTTCCGGCACGGGTATGAATA ACGCAGAAAAAGTTGCCGGTGCTGCCGGTTCAACCCTGGCGATACCAAGATTGGGGATACCACAGATTGTTTTTGCCGAT GGGCCGGTAGGTGTCAGGCTGGGGGCAGGACCCACCGGCGGTGAGAAGCGCTTTGCCACAGGGTTTCCAGTGTCGGTGGC AATGGCGGCGACCTGGGACCCCGCCATTATTAAGCGTGTCGGCGGAGCCATTGGTGATGAAGCCAAGCAATATGGTGTAG ATTTAATTCTCGGTCCTGCGATTAATATTCAGCGCCACCCATTGAATGGGCGTAATTTCGAATATTTCACAGAAGACCCC TTACTCAATGCCATCATGACGGCCAGTTATATTGACGGTATGCAGACCGAGGGCGTGGGCGCAGTGCTCAAACATTTTGC CGCCAACAATCAGGAAACACGCCGTCAGATAGTCAACGAGATTATTTCAGACCGTGCGCTACATGAAATCTATTTCCCCG GTTTCGAATATGCCATGGAAAAGGCGCAACCTTGGGCAGTAATGAGCTCTTATCCATCAATTAATGGGACACCATCCTCG CAAAATCCCTGGTTATTAAAGGATGTCTTGCGCCAACAATGGAAGTTCGATGGCTTTGTCATGTCAGATTGGTATGGTGT GGCCGATCCGGTCAGCGCATTGAAAGGGGGTAACGATCTCAATATGCCGGGTGGGCGCACACCAGACGACTCACTATTCC TAACACCCAATACCGATCCTAAAGAAGTGGTGTTAGCGGCGCTAAAGTCTGGTGAGCTAACCCAAGACCAGATAGACGAA AATATTCGCAATATCCTCAATGTCGTGATCAAGACTCACCGGTTCAAAAACGGGGACGCGGCCATGATGCCAGAACCTGT CGATCATTCAGCATTGGCGCGACAAATTGCAGCAGATTCAATGGTATTACTAAAAAATGATGCACATACCCTTCCAATAA AAGCCGCCTTCCGCGTTGCCGCTTTCGGTCAAAATATTGACAATTTCTTTGTAACCGGAGGGGGGAGCGCGGAGGTCAAT ATTGATCCCAAACGCTTGGTGACACTGCCACAGGGCCTGAAAAACGCAGGGATAGCGCTCATCAGGCAGATTGGGGATCA GGCGTTGGATGAACCGGTTAACCAGCCTGCCCTCACTAAAGCAGCACAACAGAGTGATATCGCCCTGATTTCGATCGGCC GCAGTTCAACAGAGGGGGCTGATCGCTACTCTATGGCGATGCATCCCGATGAAGTGGCAATGATTAAAAAGGTGGCCTCA GCGTTCCATCAGCAGAATAAAAAGGTGGTGGTTCTGCTCAATATTGGTTCGCCGATAGAAATGACCTCTTGGGAACAATA TGCTGATGCCATTCTTCTCACCTGGCAACCCGGTGAACAGGCAGGGAATGCGGTTGCCGATATTCTGCTTGGTAAGGTAA ATCCTTCGGGTAAATTGCCGCTAACCTTCCCGAAACGACTCGAAGATTCACCAAGCTTTGGTAACTACCCTGGTAACGCT AAAACAGTTATCTATGGTGAAGGGATCTATGTCGGCTATCGCTACTTTGATACCAAGCGCATTGCCCCGATGTATCCATT CGGTTATGGCCTTTCTTATTCCACAGTGAATTATGGGAAAATCAGCCCAGAAAAACCGGTATTCAACATCGATACAGAGA ATAGTATTGAGGTCAGTATCCCTGTACGTAATACCTCCGGTATCGATACAAAAGAGGTTGTGCAGCTTTATGTTCATGAC AATGCCTCACGCCTTGATCGGCCAGAACAGGAACTGAAAGCATTTGAAAAAGTCAGCCTGTCGGCGGGAGAGGAGAAACG CGTGGCCTTCAAACTGGATAAACGCGCGTTCTCTTATTACGATGAGGATAAAAACAACTGGGTGCTTGAACCGGGGCTCT TCACACTGCGCATTGGGCGTTCGTCAAGAGATATCCATGCAGAAACACCTCTGATTGTGAAATCCTCGACCCCAGCTTTC TCGTTTGATACCCCCTGGATTGACATCCAGACGTATGAAAAAGCGGCCACGATCGTCGCCCGTTTTATCGGTGATGAGCA AACTAACGCTTGGATTTATGGCAACCCAACACTGGGTGATAAACTGGAAGATGCCCTGAAACTGAAACCTGAATTCGCTA AAGATGAGGCGAAAAGGCAGAAACTGAAGCAGGAAATCTTACAAGAAATCAATTCATTGTAA
Upstream 100 bases:
>100_bases TTCACGGATGGTATACCCCCGTATTGATGGGGGTATACCACCACTGGCGGGCCTATGTGAGCATAAACAACTTCACTTTC ATTAGTACAATGGATGATAT
Downstream 100 bases:
>100_bases TGACTGAGCTTTCAATGCTTTGCTAACGCCCTGCTGCTTTTCCATCTCTGCCAGGGCGTTTTTCAAAAACTATCTGGGTC AGCCCGTGGTGATCCCAAGA
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MNLNKTGFFTAFTFLSAPVWATPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAGAAGSTLAIPRLGIPQIVFAD GPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRVGGAIGDEAKQYGVDLILGPAINIQRHPLNGRNFEYFTEDP LLNAIMTASYIDGMQTEGVGAVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDPKEVVLAALKSGELTQDQIDE NIRNILNVVIKTHRFKNGDAAMMPEPVDHSALARQIAADSMVLLKNDAHTLPIKAAFRVAAFGQNIDNFFVTGGGSAEVN IDPKRLVTLPQGLKNAGIALIRQIGDQALDEPVNQPALTKAAQQSDIALISIGRSSTEGADRYSMAMHPDEVAMIKKVAS AFHQQNKKVVVLLNIGSPIEMTSWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLPLTFPKRLEDSPSFGNYPGNA KTVIYGEGIYVGYRYFDTKRIAPMYPFGYGLSYSTVNYGKISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHD NASRLDRPEQELKAFEKVSLSAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQKLKQEILQEINSL
Sequences:
>Translated_793_residues MNLNKTGFFTAFTFLSAPVWATPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAGAAGSTLAIPRLGIPQIVFAD GPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRVGGAIGDEAKQYGVDLILGPAINIQRHPLNGRNFEYFTEDP LLNAIMTASYIDGMQTEGVGAVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDPKEVVLAALKSGELTQDQIDE NIRNILNVVIKTHRFKNGDAAMMPEPVDHSALARQIAADSMVLLKNDAHTLPIKAAFRVAAFGQNIDNFFVTGGGSAEVN IDPKRLVTLPQGLKNAGIALIRQIGDQALDEPVNQPALTKAAQQSDIALISIGRSSTEGADRYSMAMHPDEVAMIKKVAS AFHQQNKKVVVLLNIGSPIEMTSWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLPLTFPKRLEDSPSFGNYPGNA KTVIYGEGIYVGYRYFDTKRIAPMYPFGYGLSYSTVNYGKISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHD NASRLDRPEQELKAFEKVSLSAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQKLKQEILQEINSL >Mature_793_residues MNLNKTGFFTAFTFLSAPVWATPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAGAAGSTLAIPRLGIPQIVFAD GPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRVGGAIGDEAKQYGVDLILGPAINIQRHPLNGRNFEYFTEDP LLNAIMTASYIDGMQTEGVGAVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDPKEVVLAALKSGELTQDQIDE NIRNILNVVIKTHRFKNGDAAMMPEPVDHSALARQIAADSMVLLKNDAHTLPIKAAFRVAAFGQNIDNFFVTGGGSAEVN IDPKRLVTLPQGLKNAGIALIRQIGDQALDEPVNQPALTKAAQQSDIALISIGRSSTEGADRYSMAMHPDEVAMIKKVAS AFHQQNKKVVVLLNIGSPIEMTSWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLPLTFPKRLEDSPSFGNYPGNA KTVIYGEGIYVGYRYFDTKRIAPMYPFGYGLSYSTVNYGKISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHD NASRLDRPEQELKAFEKVSLSAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQKLKQEILQEINSL
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=661, Percent_Identity=30.4084720121029, Blast_Score=261, Evalue=1e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 86869; Mature: 86869
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNKTGFFTAFTFLSAPVWATPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAG CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHC AAGSTLAIPRLGIPQIVFADGPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRV CCCCEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCEECCCCEEEEEECCCCHHHHHHH GGAIGDEAKQYGVDLILGPAINIQRHPLNGRNFEYFTEDPLLNAIMTASYIDGMQTEGVG CCCCCCHHHHCCCEEEECCCCCEEECCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCHH AVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCC QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDP CCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCH KEVVLAALKSGELTQDQIDENIRNILNVVIKTHRFKNGDAAMMPEPVDHSALARQIAADS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC MVLLKNDAHTLPIKAAFRVAAFGQNIDNFFVTGGGSAEVNIDPKRLVTLPQGLKNAGIAL EEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECHHHEEECCCCCHHHHHHH IRQIGDQALDEPVNQPALTKAAQQSDIALISIGRSSTEGADRYSMAMHPDEVAMIKKVAS HHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHH AFHQQNKKVVVLLNIGSPIEMTSWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLP HHHHCCCCEEEEEECCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHEECCCCCCCCC LTFPKRLEDSPSFGNYPGNAKTVIYGEGIYVGYRYFDTKRIAPMYPFGYGLSYSTVNYGK CCCHHHCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCC ISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHDNASRLDRPEQELKAFEKVSL CCCCCCEEECCCCCEEEEEEEECCCCCCCHHHEEEEEECCCHHHCCCCHHHHHHHHHHHC SAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF CCCCCCEEEEEEHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEECCCCCE SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQ ECCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH KLKQEILQEINSL HHHHHHHHHHHCC >Mature Secondary Structure MNLNKTGFFTAFTFLSAPVWATPQLKEAESIPSVIAAMTLEEKAAFVSGTGMNNAEKVAG CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHC AAGSTLAIPRLGIPQIVFADGPVGVRLGAGPTGGEKRFATGFPVSVAMAATWDPAIIKRV CCCCEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCEECCCCEEEEEECCCCHHHHHHH GGAIGDEAKQYGVDLILGPAINIQRHPLNGRNFEYFTEDPLLNAIMTASYIDGMQTEGVG CCCCCCHHHHCCCEEEECCCCCEEECCCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCHH AVLKHFAANNQETRRQIVNEIISDRALHEIYFPGFEYAMEKAQPWAVMSSYPSINGTPSS HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCC QNPWLLKDVLRQQWKFDGFVMSDWYGVADPVSALKGGNDLNMPGGRTPDDSLFLTPNTDP CCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCH KEVVLAALKSGELTQDQIDENIRNILNVVIKTHRFKNGDAAMMPEPVDHSALARQIAADS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC MVLLKNDAHTLPIKAAFRVAAFGQNIDNFFVTGGGSAEVNIDPKRLVTLPQGLKNAGIAL EEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEECHHHEEECCCCCHHHHHHH IRQIGDQALDEPVNQPALTKAAQQSDIALISIGRSSTEGADRYSMAMHPDEVAMIKKVAS HHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHH AFHQQNKKVVVLLNIGSPIEMTSWEQYADAILLTWQPGEQAGNAVADILLGKVNPSGKLP HHHHCCCCEEEEEECCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHEECCCCCCCCC LTFPKRLEDSPSFGNYPGNAKTVIYGEGIYVGYRYFDTKRIAPMYPFGYGLSYSTVNYGK CCCHHHCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCC ISPEKPVFNIDTENSIEVSIPVRNTSGIDTKEVVQLYVHDNASRLDRPEQELKAFEKVSL CCCCCCEEECCCCCEEEEEEEECCCCCCCHHHEEEEEECCCHHHCCCCHHHHHHHHHHHC SAGEEKRVAFKLDKRAFSYYDEDKNNWVLEPGLFTLRIGRSSRDIHAETPLIVKSSTPAF CCCCCCEEEEEEHHHHHHHCCCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEECCCCCE SFDTPWIDIQTYEKAATIVARFIGDEQTNAWIYGNPTLGDKLEDALKLKPEFAKDEAKRQ ECCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH KLKQEILQEINSL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2505054 [H]